Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010014H12.5 |
| Conread position: | 11-480 |
| Cow position: | chr1:25888480-25888010 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 121-560 |
| Cow position: | chr1:54366999-54366571 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 124-437 |
| Cow position: | chr1:69059026-69059339 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 92, 67 |
| Conread position: | 193-607 |
| Cow position: | chr1:102554642-102555048 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 200-606 |
| Cow position: | chr1:88533289-88532884 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 277 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 169, 9 |
| Conread position: | 301-610 |
| Cow position: | chr1:31593878-31594186 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 154, 116 |
| Conread position: | 372-609 |
| Cow position: | chr1:45024969-45024733 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 168, 16 |
| Conread position: | 602-816 |
| Cow position: | chr1:45097496-45097707 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 606-780 |
| Cow position: | chr1:55323731-55323554 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 70, 172 |
| Conread position: | 609-793 |
| Cow position: | chr1:61733055-61733236 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 108, 54 |
| Conread position: | 609-800 |
| Cow position: | chr1:28276435-28276625 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 609-806 |
| Cow position: | chr1:59933350-59933545 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 609-814 |
| Cow position: | chr1:33711854-33712066 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 609-814 |
| Cow position: | chr1:42736251-42736459 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 62, 159 |
| Conread position: | 609-814 |
| Cow position: | chr1:52918822-52918617 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 609-814 |
| Cow position: | chr1:69402786-69402995 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 609-814 |
| Cow position: | chr1:79109091-79109295 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 609-814 |
| Cow position: | chr1:87969145-87969352 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 56 |
| Conread position: | 609-814 |
| Cow position: | chr1:102555881-102556079 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 609-815 |
| Cow position: | chr1:32361319-32361115 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 53 |
| Conread position: | 609-815 |
| Cow position: | chr1:34689137-34689337 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 109, 16 |
| Conread position: | 609-815 |
| Cow position: | chr1:53045987-53045776 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 609-815 |
| Cow position: | chr1:77163575-77163782 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 609-815 |
| Cow position: | chr1:82355522-82355734 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 187 |
| Conread position: | 609-815 |
| Cow position: | chr1:86608995-86609198 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 609-815 |
| Cow position: | chr1:98783848-98784054 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 609-816 |
| Cow position: | chr1:1461533-1461323 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 609-816 |
| Cow position: | chr1:18244595-18244375 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 609-816 |
| Cow position: | chr1:28801632-28801415 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 609-816 |
| Cow position: | chr1:40307861-40308071 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 108, 46 |
| Conread position: | 609-816 |
| Cow position: | chr1:40513703-40513496 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 108, 148 |
| Conread position: | 609-816 |
| Cow position: | chr1:54366023-54365819 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 115, 12 |
| Conread position: | 609-816 |
| Cow position: | chr1:69536704-69536907 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 609-816 |
| Cow position: | chr1:77112644-77112440 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 609-816 |
| Cow position: | chr1:88635169-88635376 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 609-816 |
| Cow position: | chr1:89740449-89740240 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 609-816 |
| Cow position: | chr1:89770887-89770678 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 609-816 |
| Cow position: | chr1:89809826-89809617 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 610-733 |
| Cow position: | chr1:67902623-67902502 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 610-789 |
| Cow position: | chr1:88130553-88130736 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-805 |
| Cow position: | chr1:17942016-17941817 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 610-806 |
| Cow position: | chr1:13253636-13253443 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 610-806 |
| Cow position: | chr1:57567745-57567945 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-806 |
| Cow position: | chr1:62244853-62244653 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-806 |
| Cow position: | chr1:62925408-62925608 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-806 |
| Cow position: | chr1:85881537-85881738 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:3386211-3386004 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 610-814 |
| Cow position: | chr1:5318555-5318761 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 171 |
| Conread position: | 610-814 |
| Cow position: | chr1:5501770-5501978 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 168 |
| Conread position: | 610-814 |
| Cow position: | chr1:6708296-6708091 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 110, 48 |
| Conread position: | 610-814 |
| Cow position: | chr1:8824857-8825053 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 610-814 |
| Cow position: | chr1:25180236-25180028 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 179 |
| Conread position: | 610-814 |
| Cow position: | chr1:25549858-25550066 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 168 |
| Conread position: | 610-814 |
| Cow position: | chr1:28872872-28873080 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:33550718-33550921 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 610-814 |
| Cow position: | chr1:49974396-49974188 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:52359481-52359273 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:56194136-56193929 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 80 |
| Conread position: | 610-814 |
| Cow position: | chr1:57367337-57367130 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:63605988-63605779 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:69922668-69922463 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 61, 166 |
| Conread position: | 610-814 |
| Cow position: | chr1:72187076-72186870 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 610-814 |
| Cow position: | chr1:79457172-79456965 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:86699423-86699215 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:93854315-93854523 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr1:97226905-97226703 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 109, 63 |
| Conread position: | 610-815 |
| Cow position: | chr1:33388090-33388308 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 610-815 |
| Cow position: | chr1:61738707-61738502 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 610-815 |
| Cow position: | chr1:67313723-67313922 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 610-815 |
| Cow position: | chr1:82407545-82407341 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 610-815 |
| Cow position: | chr1:99021160-99020952 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 610-816 |
| Cow position: | chr1:13879930-13880140 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 610-816 |
| Cow position: | chr1:57656353-57656551 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 610-816 |
| Cow position: | chr1:76545745-76545538 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 611-806 |
| Cow position: | chr1:33851075-33851273 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 611-806 |
| Cow position: | chr1:72080568-72080767 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 611-814 |
| Cow position: | chr1:31366280-31366074 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 5 |
| Conread position: | 612-788 |
| Cow position: | chr1:84149212-84149382 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 613-774 |
| Cow position: | chr1:43019923-43020086 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 89 |
| Conread position: | 613-806 |
| Cow position: | chr1:39543569-39543766 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 613-806 |
| Cow position: | chr1:59210336-59210144 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 58, 75 |
| Conread position: | 613-806 |
| Cow position: | chr1:71562777-71562583 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 613-806 |
| Cow position: | chr1:97123630-97123826 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 178 |
| Conread position: | 613-814 |
| Cow position: | chr1:8554126-8554331 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 58, 165 |
| Conread position: | 613-814 |
| Cow position: | chr1:17012938-17012735 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 189 |
| Conread position: | 613-814 |
| Cow position: | chr1:18880587-18880390 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 105, 56 |
| Conread position: | 613-814 |
| Cow position: | chr1:20828687-20828892 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 613-814 |
| Cow position: | chr1:56489637-56489843 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 56, 179 |
| Conread position: | 613-814 |
| Cow position: | chr1:67835340-67835136 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 613-814 |
| Cow position: | chr1:89425388-89425590 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 613-815 |
| Cow position: | chr1:63501258-63501462 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 613-816 |
| Cow position: | chr1:82918860-82918657 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 106, 68 |
| Conread position: | 613-816 |
| Cow position: | chr1:89899904-89899697 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 60, 177 |
| Conread position: | 618-814 |
| Cow position: | chr1:79336001-79335802 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 37 |
| Conread position: | 618-814 |
| Cow position: | chr1:91893308-91893116 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 73 |
| Conread position: | 618-816 |
| Cow position: | chr1:25887342-25887153 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 129, 44 |
| Conread position: | 618-816 |
| Cow position: | chr1:76703565-76703375 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 619-798 |
| Cow position: | chr1:87207607-87207430 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 44 |
| Conread position: | 619-805 |
| Cow position: | chr1:76623141-76622964 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 619-814 |
| Cow position: | chr1:55775958-55776156 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 619-814 |
| Cow position: | chr1:85780974-85780775 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 619-814 |
| Cow position: | chr1:100597578-100597379 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 619-815 |
| Cow position: | chr1:13645535-13645731 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 105 |
| Conread position: | 619-815 |
| Cow position: | chr1:30027737-30027537 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 619-816 |
| Cow position: | chr1:18406386-18406188 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 47, 166 |
| Conread position: | 619-816 |
| Cow position: | chr1:22000153-21999951 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 619-816 |
| Cow position: | chr1:38414611-38414805 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 619-816 |
| Cow position: | chr1:42290196-42290398 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 619-816 |
| Cow position: | chr1:59674293-59674488 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 142 |
| Conread position: | 619-816 |
| Cow position: | chr1:72656786-72656986 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 96, 81 |
| Conread position: | 619-816 |
| Cow position: | chr1:87244603-87244798 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 100, 44 |
| Conread position: | 619-816 |
| Cow position: | chr1:101149647-101149837 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 620-806 |
| Cow position: | chr1:21087221-21087408 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 620-814 |
| Cow position: | chr1:98661486-98661293 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 620-816 |
| Cow position: | chr1:72136448-72136644 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 622-752 |
| Cow position: | chr1:67286297-67286428 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 622-777 |
| Cow position: | chr1:99349211-99349056 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 622-787 |
| Cow position: | chr1:82652444-82652610 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 622-789 |
| Cow position: | chr1:31396223-31396390 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 622-793 |
| Cow position: | chr1:57661347-57661522 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 622-806 |
| Cow position: | chr1:17036751-17036563 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 622-806 |
| Cow position: | chr1:33895486-33895674 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-806 |
| Cow position: | chr1:40684883-40684696 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 622-806 |
| Cow position: | chr1:85791498-85791682 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 98, 49 |
| Conread position: | 622-806 |
| Cow position: | chr1:86548324-86548139 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 622-806 |
| Cow position: | chr1:91898808-91898993 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 622-808 |
| Cow position: | chr1:80359359-80359173 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 622-811 |
| Cow position: | chr1:18014380-18014190 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 622-813 |
| Cow position: | chr1:55276679-55276484 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:22864111-22863915 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:28710723-28710919 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:30283729-30283539 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 622-814 |
| Cow position: | chr1:61308809-61309005 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:68607741-68607541 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:69766271-69766465 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:79920920-79920724 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 622-814 |
| Cow position: | chr1:82564311-82564506 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-815 |
| Cow position: | chr1:40053162-40053358 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 49, 185 |
| Conread position: | 622-816 |
| Cow position: | chr1:102549037-102549235 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 624-815 |
| Cow position: | chr1:40953519-40953704 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 624-815 |
| Cow position: | chr1:101858174-101857980 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 628-816 |
| Cow position: | chr1:73009613-73009805 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 636-808 |
| Cow position: | chr1:52233290-52233115 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 638-806 |
| Cow position: | chr1:13450033-13450203 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 641-806 |
| Cow position: | chr1:99910777-99910946 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 641-816 |
| Cow position: | chr1:23050666-23050843 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 123 |
| Conread position: | 642-816 |
| Cow position: | chr1:37419918-37419747 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 644-814 |
| Cow position: | chr1:15347756-15347582 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 644-816 |
| Cow position: | chr1:79637100-79636925 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 644-816 |
| Cow position: | chr1:79885003-79884825 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 672-816 |
| Cow position: | chr1:62853984-62853839 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 678-789 |
| Cow position: | chr1:45024053-45023939 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.