Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010014H12.5 |
| Conread position: | 254-476 |
| Cow position: | chr12:2840716-2840488 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 602-815 |
| Cow position: | chr12:8982676-8982464 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 608-746 |
| Cow position: | chr12:10483787-10483923 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 609-733 |
| Cow position: | chr12:2839847-2839727 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 609-773 |
| Cow position: | chr12:22255506-22255670 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 609-806 |
| Cow position: | chr12:8310928-8311129 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 609-807 |
| Cow position: | chr12:42860072-42859874 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 609-808 |
| Cow position: | chr12:13949747-13949564 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 609-816 |
| Cow position: | chr12:2541-2751 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 198 |
| Conread position: | 609-816 |
| Cow position: | chr12:21499861-21500071 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 609-816 |
| Cow position: | chr12:21901689-21901893 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 64, 136 |
| Conread position: | 609-816 |
| Cow position: | chr12:48404792-48404997 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 112, 56 |
| Conread position: | 610-814 |
| Cow position: | chr12:6406903-6406697 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 178 |
| Conread position: | 610-814 |
| Cow position: | chr12:11097985-11098193 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | chr12:22026501-22026703 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 610-814 |
| Cow position: | chr12:28766273-28766069 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 610-816 |
| Cow position: | chr12:45261358-45261571 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 612-814 |
| Cow position: | chr12:25101313-25101110 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 612-816 |
| Cow position: | chr12:347579-347778 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 39 |
| Conread position: | 613-814 |
| Cow position: | chr12:21254909-21254704 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 613-814 |
| Cow position: | chr12:32653294-32653496 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 618-815 |
| Cow position: | chr12:1137345-1137536 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 51 |
| Conread position: | 619-808 |
| Cow position: | chr12:22332375-22332565 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 619-816 |
| Cow position: | chr12:2282299-2282500 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 168 |
| Conread position: | 622-806 |
| Cow position: | chr12:43031627-43031440 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 163 |
| Conread position: | 622-814 |
| Cow position: | chr12:26141569-26141765 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 625-780 |
| Cow position: | chr12:14662852-14662695 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 626-814 |
| Cow position: | chr12:21426456-21426645 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 632-805 |
| Cow position: | chr12:20998354-20998179 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 634-814 |
| Cow position: | chr12:3360670-3360855 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 644-814 |
| Cow position: | chr12:26947202-26947028 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 13 |
Show alignments to all cow chromosomes.