Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010014H12.5 |
| Conread position: | 123-600 |
| Cow position: | |
| Alignm length: | 481 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 596-806 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 596-814 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 608-801 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 76, 167 |
| Conread position: | 609-750 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 609-751 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 609-763 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 609-789 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 67, 47 |
| Conread position: | 609-804 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 609-806 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 126 |
| Conread position: | 609-807 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 609-813 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 609-814 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 609-815 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 609-815 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 53 |
| Conread position: | 609-815 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 111, 48 |
| Conread position: | 609-815 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 50 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 87 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 609-816 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 610-781 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 610-802 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 610-806 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 53 |
| Conread position: | 610-806 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 118 |
| Conread position: | 610-806 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-814 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 610-814 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 142, 77 |
| Conread position: | 610-814 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 610-814 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 610-814 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 610-814 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 610-815 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 610-815 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 107, 64 |
| Conread position: | 610-815 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 610-816 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 63, 196 |
| Conread position: | 610-816 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 611-806 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 101, 47 |
| Conread position: | 612-815 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 613-806 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 613-813 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 613-814 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 177 |
| Conread position: | 613-814 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 613-815 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 613-816 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 613-816 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 616-816 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 619-802 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 619-808 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 619-809 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 619-814 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 619-816 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 619-816 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 619-816 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 622-802 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 622-806 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-806 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 622-814 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 622-816 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 622-816 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 623-815 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 631-814 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 635-816 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 97 |
| Conread position: | 636-814 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 636-814 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 663-808 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 65 |
| Conread position: | 682-816 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 686-816 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 94 |
Show alignments to all cow chromosomes.