Cow genome map
Conread name: | Ss1.1-Lng1-LNG010014H12.5 |
Conread position: | 121-466 |
Cow position: | chr17:42263115-42263456 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 225 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 121-474 |
Cow position: | chr17:42262576-42262926 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 241 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 153, 70 |
Conread position: | 232-544 |
Cow position: | chr17:24607925-24608228 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 209 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 300-469 |
Cow position: | chr17:4080318-4080486 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 595-816 |
Cow position: | chr17:2587953-2588156 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 161 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 78, 7 |
Conread position: | 596-816 |
Cow position: | chr17:22131849-22132071 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 164 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 41, 6 |
Conread position: | 609-785 |
Cow position: | chr17:18185895-18185714 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 609-801 |
Cow position: | chr17:39933315-39933507 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 149 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 64, 47 |
Conread position: | 609-815 |
Cow position: | chr17:4671824-4672031 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 153 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 59, 30 |
Conread position: | 609-816 |
Cow position: | chr17:2146839-2147040 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 108, 34 |
Conread position: | 609-816 |
Cow position: | chr17:2173506-2173720 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 609-816 |
Cow position: | chr17:4295007-4295206 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 106, 47 |
Conread position: | 609-816 |
Cow position: | chr17:15370707-15370915 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 7 |
Conread position: | 609-816 |
Cow position: | chr17:16889754-16889963 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 609-816 |
Cow position: | chr17:20401311-20401528 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 57, 100 |
Conread position: | 609-816 |
Cow position: | chr17:22429853-22429642 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 165 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 609-816 |
Cow position: | chr17:27345434-27345645 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 609-816 |
Cow position: | chr17:35591844-35592055 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 610-806 |
Cow position: | chr17:2738008-2738208 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 610-806 |
Cow position: | chr17:15143733-15143539 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 107, 53 |
Conread position: | 610-814 |
Cow position: | chr17:3643206-3642998 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-814 |
Cow position: | chr17:11088091-11087886 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 154 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 61, 39 |
Conread position: | 610-814 |
Cow position: | chr17:13929298-13929506 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-814 |
Cow position: | chr17:14308676-14308466 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 148 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 36, 172 |
Conread position: | 610-814 |
Cow position: | chr17:14893792-14893999 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 154 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 61, 25 |
Conread position: | 610-814 |
Cow position: | chr17:15850028-15850238 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 152 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 61, 163 |
Conread position: | 610-814 |
Cow position: | chr17:18104050-18103842 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 149 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-814 |
Cow position: | chr17:19269734-19269528 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 24, 57 |
Conread position: | 610-816 |
Cow position: | chr17:3710429-3710225 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 159 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 137, 45 |
Conread position: | 610-816 |
Cow position: | chr17:23857402-23857196 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 109, 62 |
Conread position: | 611-806 |
Cow position: | chr17:8208741-8208937 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 106, 47 |
Conread position: | 611-808 |
Cow position: | chr17:4081284-4081478 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 104, 55 |
Conread position: | 611-814 |
Cow position: | chr17:15435422-15435629 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 611-815 |
Cow position: | chr17:152836-152637 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 62, 37 |
Conread position: | 611-816 |
Cow position: | chr17:28109719-28109924 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 62, 5 |
Conread position: | 612-816 |
Cow position: | chr17:42264159-42264345 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 105, 46 |
Conread position: | 613-774 |
Cow position: | chr17:11783004-11783169 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 613-814 |
Cow position: | chr17:22160549-22160754 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 616-816 |
Cow position: | chr17:14325857-14325657 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 150 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 57, 28 |
Conread position: | 619-816 |
Cow position: | chr17:1946615-1946818 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 155 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 619-816 |
Cow position: | chr17:20183586-20183389 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 152 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 100, 47 |
Conread position: | 620-806 |
Cow position: | chr17:14217384-14217194 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 622-806 |
Cow position: | chr17:24780690-24780878 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 143 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-806 |
Cow position: | chr17:25737306-25737493 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 49, 17 |
Conread position: | 622-806 |
Cow position: | chr17:43988180-43988365 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 98, 36 |
Conread position: | 622-806 |
Cow position: | chr17:44853286-44853104 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 79, 41 |
Conread position: | 622-814 |
Cow position: | chr17:1383169-1382976 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 98, 36 |
Conread position: | 622-814 |
Cow position: | chr17:1879734-1879930 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 13, 65 |
Conread position: | 622-814 |
Cow position: | chr17:6089519-6089323 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-814 |
Cow position: | chr17:9653807-9653618 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 98, 34 |
Conread position: | 622-814 |
Cow position: | chr17:16859914-16859718 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-814 |
Cow position: | chr17:20666084-20665888 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-816 |
Cow position: | chr17:228659-228462 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 654-816 |
Cow position: | chr17:18301968-18301811 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 654-816 |
Cow position: | chr17:20088056-20087891 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 19, 118 |
Conread position: | 660-816 |
Cow position: | chr17:2287069-2287226 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 16, 108 |
Show alignments to all cow chromosomes.