Cow genome map

Conread name: Ss1.1-Lng1-LNG010014H12.5

Conread position: 121-466
Cow position: chr17:42263115-42263456 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 225
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 101

Conread position: 121-474
Cow position: chr17:42262576-42262926 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 153, 70

Conread position: 232-544
Cow position: chr17:24607925-24608228 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 300-469
Cow position: chr17:4080318-4080486 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 45

Conread position: 595-816
Cow position: chr17:2587953-2588156 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 7

Conread position: 596-816
Cow position: chr17:22131849-22132071 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 41, 6

Conread position: 609-785
Cow position: chr17:18185895-18185714 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 609-801
Cow position: chr17:39933315-39933507 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 47

Conread position: 609-815
Cow position: chr17:4671824-4672031 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 30

Conread position: 609-816
Cow position: chr17:2146839-2147040 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 34

Conread position: 609-816
Cow position: chr17:2173506-2173720 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 609-816
Cow position: chr17:4295007-4295206 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 106, 47

Conread position: 609-816
Cow position: chr17:15370707-15370915 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 7

Conread position: 609-816
Cow position: chr17:16889754-16889963 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 609-816
Cow position: chr17:20401311-20401528 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 100

Conread position: 609-816
Cow position: chr17:22429853-22429642 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 0

Conread position: 609-816
Cow position: chr17:27345434-27345645 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 609-816
Cow position: chr17:35591844-35592055 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 610-806
Cow position: chr17:2738008-2738208 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 610-806
Cow position: chr17:15143733-15143539 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 53

Conread position: 610-814
Cow position: chr17:3643206-3642998 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position: chr17:11088091-11087886 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 39

Conread position: 610-814
Cow position: chr17:13929298-13929506 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position: chr17:14308676-14308466 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 172

Conread position: 610-814
Cow position: chr17:14893792-14893999 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 25

Conread position: 610-814
Cow position: chr17:15850028-15850238 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 163

Conread position: 610-814
Cow position: chr17:18104050-18103842 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position: chr17:19269734-19269528 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 57

Conread position: 610-816
Cow position: chr17:3710429-3710225 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 137, 45

Conread position: 610-816
Cow position: chr17:23857402-23857196 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 109, 62

Conread position: 611-806
Cow position: chr17:8208741-8208937 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 106, 47

Conread position: 611-808
Cow position: chr17:4081284-4081478 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 55

Conread position: 611-814
Cow position: chr17:15435422-15435629 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 611-815
Cow position: chr17:152836-152637 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 37

Conread position: 611-816
Cow position: chr17:28109719-28109924 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 5

Conread position: 612-816
Cow position: chr17:42264159-42264345 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 46

Conread position: 613-774
Cow position: chr17:11783004-11783169 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 613-814
Cow position: chr17:22160549-22160754 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 616-816
Cow position: chr17:14325857-14325657 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 28

Conread position: 619-816
Cow position: chr17:1946615-1946818 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 619-816
Cow position: chr17:20183586-20183389 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 100, 47

Conread position: 620-806
Cow position: chr17:14217384-14217194 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 622-806
Cow position: chr17:24780690-24780878 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 622-806
Cow position: chr17:25737306-25737493 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 17

Conread position: 622-806
Cow position: chr17:43988180-43988365 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 36

Conread position: 622-806
Cow position: chr17:44853286-44853104 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 41

Conread position: 622-814
Cow position: chr17:1383169-1382976 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 36

Conread position: 622-814
Cow position: chr17:1879734-1879930 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 65

Conread position: 622-814
Cow position: chr17:6089519-6089323 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position: chr17:9653807-9653618 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 34

Conread position: 622-814
Cow position: chr17:16859914-16859718 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position: chr17:20666084-20665888 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 622-816
Cow position: chr17:228659-228462 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 654-816
Cow position: chr17:18301968-18301811 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 654-816
Cow position: chr17:20088056-20087891 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 118

Conread position: 660-816
Cow position: chr17:2287069-2287226 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 108

Show alignments to all cow chromosomes.