Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010014H12.5 |
| Conread position: | 295-545 |
| Cow position: | chr24:38634562-38634810 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 609-765 |
| Cow position: | chr24:8153001-8152846 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 609-774 |
| Cow position: | chr24:6352026-6352194 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 63, 155 |
| Conread position: | 609-807 |
| Cow position: | chr24:12940038-12940238 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 609-815 |
| Cow position: | chr24:6511299-6511088 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 31 |
| Conread position: | 609-815 |
| Cow position: | chr24:14390891-14390690 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 609-816 |
| Cow position: | chr24:12288892-12288688 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 609-816 |
| Cow position: | chr24:13531703-13531495 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 609-816 |
| Cow position: | chr24:17187376-17187582 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 610-796 |
| Cow position: | chr24:6048088-6048274 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 610-801 |
| Cow position: | chr24:33933199-33933392 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 610-801 |
| Cow position: | chr24:39678263-39678452 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 56 |
| Conread position: | 610-806 |
| Cow position: | chr24:2635951-2636151 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 610-806 |
| Cow position: | chr24:15392472-15392278 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 610-814 |
| Cow position: | chr24:4415692-4415486 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 610-814 |
| Cow position: | chr24:19833215-19833420 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 610-816 |
| Cow position: | chr24:1447401-1447598 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 109, 46 |
| Conread position: | 611-814 |
| Cow position: | chr24:6083849-6084056 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 611-815 |
| Cow position: | chr24:12568086-12568284 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 613-814 |
| Cow position: | chr24:6645252-6645452 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 617-814 |
| Cow position: | chr24:9188893-9188692 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 618-814 |
| Cow position: | chr24:35841774-35841578 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 619-814 |
| Cow position: | chr24:14384771-14384574 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 619-816 |
| Cow position: | chr24:35838785-35838584 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 619-816 |
| Cow position: | chr24:36707698-36707887 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 622-780 |
| Cow position: | chr24:36560240-36560078 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 622-806 |
| Cow position: | chr24:6434084-6434272 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 622-806 |
| Cow position: | chr24:13021515-13021699 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 622-806 |
| Cow position: | chr24:16084817-16084629 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 622-806 |
| Cow position: | chr24:16649457-16649269 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 150 |
| Conread position: | 622-810 |
| Cow position: | chr24:12086043-12086233 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 48 |
| Conread position: | 622-814 |
| Cow position: | chr24:7060945-7061139 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 622-814 |
| Cow position: | chr24:8029994-8030190 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 622-814 |
| Cow position: | chr24:12485474-12485278 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 622-814 |
| Cow position: | chr24:44017389-44017585 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 622-816 |
| Cow position: | chr24:6335537-6335736 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 108 |
| Conread position: | 622-816 |
| Cow position: | chr24:12114190-12114000 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 624-815 |
| Cow position: | chr24:14282759-14282568 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 625-814 |
| Cow position: | chr24:22951982-22952175 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 625-816 |
| Cow position: | chr24:14584940-14585134 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 630-816 |
| Cow position: | chr24:12161730-12161920 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 633-777 |
| Cow position: | chr24:9092419-9092271 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 673-816 |
| Cow position: | chr24:38635656-38635796 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 40 |
Show alignments to all cow chromosomes.