Cow genome map
Conread name: | Ss1.1-Lng1-LNG010014H12.5 |
Conread position: | 116-460 |
Cow position: | chr5:35279554-35279899 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 230 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 163, 73 |
Conread position: | 302-608 |
Cow position: | chr5:27487744-27488047 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 191 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 279, 77 |
Conread position: | 327-614 |
Cow position: | chr5:29438029-29437735 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 203 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 77, 134 |
Conread position: | 607-815 |
Cow position: | chr5:26508014-26508226 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 149 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 66, 102 |
Conread position: | 608-815 |
Cow position: | chr5:26054338-26054545 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 65, 103 |
Conread position: | 609-796 |
Cow position: | chr5:7811975-7811789 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 47, 55 |
Conread position: | 609-799 |
Cow position: | chr5:41551353-41551162 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 149 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 31, 36 |
Conread position: | 609-806 |
Cow position: | chr5:27569722-27569927 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 161 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 609-806 |
Cow position: | chr5:41529997-41529799 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 33, 50 |
Conread position: | 609-808 |
Cow position: | chr5:61020268-61020075 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 143 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 106, 51 |
Conread position: | 609-809 |
Cow position: | chr5:29436345-29436164 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 609-815 |
Cow position: | chr5:28570270-28570476 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 54, 39 |
Conread position: | 609-815 |
Cow position: | chr5:51771773-51771564 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 159 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 64, 57 |
Conread position: | 609-815 |
Cow position: | chr5:56858125-56857914 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 147 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 609-815 |
Cow position: | chr5:61273596-61273400 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 115, 53 |
Conread position: | 609-816 |
Cow position: | chr5:14346802-14346596 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 78, 111 |
Conread position: | 609-816 |
Cow position: | chr5:23227832-23228038 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 169 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 64, 55 |
Conread position: | 609-816 |
Cow position: | chr5:23767871-23768075 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 64, 7 |
Conread position: | 609-816 |
Cow position: | chr5:25207167-25206959 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 166 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 110, 46 |
Conread position: | 609-816 |
Cow position: | chr5:29123224-29123019 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 157 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 609-816 |
Cow position: | chr5:34202520-34202722 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 64, 27 |
Conread position: | 609-816 |
Cow position: | chr5:39165225-39165015 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 67, 48 |
Conread position: | 609-816 |
Cow position: | chr5:49181853-49182058 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 118, 53 |
Conread position: | 609-816 |
Cow position: | chr5:49593887-49593674 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 56, 166 |
Conread position: | 610-750 |
Cow position: | chr5:59282335-59282477 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-770 |
Cow position: | chr5:54793045-54792881 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 119 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 610-786 |
Cow position: | chr5:23716375-23716196 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 143 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 66, 46 |
Conread position: | 610-806 |
Cow position: | chr5:3504674-3504474 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 147 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-806 |
Cow position: | chr5:34696156-34696357 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 147 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-813 |
Cow position: | chr5:4068563-4068769 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 610-814 |
Cow position: | chr5:1342223-1342013 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 610-814 |
Cow position: | chr5:2914023-2914231 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 59, 168 |
Conread position: | 610-814 |
Cow position: | chr5:30578895-30579102 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 61, 195 |
Conread position: | 610-814 |
Cow position: | chr5:37731918-37732126 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 157 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-814 |
Cow position: | chr5:48809140-48808935 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 155 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 66, 41 |
Conread position: | 610-814 |
Cow position: | chr5:49119705-49119501 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 144 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 610-814 |
Cow position: | chr5:57482974-57482766 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 154 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-814 |
Cow position: | chr5:64782444-64782238 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 158 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 610-815 |
Cow position: | chr5:26090253-26090049 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 63, 121 |
Conread position: | 610-816 |
Cow position: | chr5:2430559-2430350 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 63, 9 |
Conread position: | 610-816 |
Cow position: | chr5:32945453-32945657 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 63, 121 |
Conread position: | 611-806 |
Cow position: | chr5:4019625-4019426 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 611-814 |
Cow position: | chr5:32772055-32772262 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 154 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 611-815 |
Cow position: | chr5:6188147-6188348 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 150 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 137, 45 |
Conread position: | 611-815 |
Cow position: | chr5:76123977-76123770 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 613-802 |
Cow position: | chr5:35299639-35299832 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 613-805 |
Cow position: | chr5:10844299-10844103 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 613-806 |
Cow position: | chr5:31706150-31706348 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 613-814 |
Cow position: | chr5:2530846-2531051 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 58, 178 |
Conread position: | 613-814 |
Cow position: | chr5:14379738-14379943 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 613-814 |
Cow position: | chr5:46663577-46663779 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 58, 75 |
Conread position: | 613-814 |
Cow position: | chr5:48468701-48468496 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 613-814 |
Cow position: | chr5:54932642-54932437 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 56, 177 |
Conread position: | 616-816 |
Cow position: | chr5:30088140-30087939 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 160 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 101, 56 |
Conread position: | 618-816 |
Cow position: | chr5:32674155-32673960 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 100, 49 |
Conread position: | 619-765 |
Cow position: | chr5:9686832-9686682 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 619-778 |
Cow position: | chr5:31204023-31203859 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 619-807 |
Cow position: | chr5:28031067-28031256 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 54, 20 |
Conread position: | 619-814 |
Cow position: | chr5:10918379-10918578 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 619-814 |
Cow position: | chr5:26769392-26769591 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 149 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 619-816 |
Cow position: | chr5:45699862-45700066 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 159 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 50, 90 |
Conread position: | 621-816 |
Cow position: | chr5:27488603-27488802 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 157 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 622-786 |
Cow position: | chr5:24329884-24330051 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 131 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 51, 33 |
Conread position: | 622-790 |
Cow position: | chr5:59144366-59144538 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 622-806 |
Cow position: | chr5:3964055-3964243 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 622-806 |
Cow position: | chr5:47831520-47831332 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 139 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-813 |
Cow position: | chr5:28006796-28006983 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 51, 7 |
Conread position: | 622-814 |
Cow position: | chr5:18665546-18665742 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-814 |
Cow position: | chr5:24576498-24576694 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 49, 166 |
Conread position: | 622-814 |
Cow position: | chr5:26079634-26079438 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 147 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-814 |
Cow position: | chr5:27909683-27909490 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 49, 29 |
Conread position: | 622-814 |
Cow position: | chr5:29042096-29042292 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-814 |
Cow position: | chr5:44459067-44459263 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 145 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 49, 169 |
Conread position: | 622-814 |
Cow position: | chr5:45182517-45182329 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 622-814 |
Cow position: | chr5:46739000-46738804 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-814 |
Cow position: | chr5:53714841-53715034 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 97, 36 |
Conread position: | 622-814 |
Cow position: | chr5:58195587-58195782 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 49, 84 |
Conread position: | 622-814 |
Cow position: | chr5:59060209-59060401 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 95, 29 |
Conread position: | 622-814 |
Cow position: | chr5:59481839-59482035 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 147 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 622-815 |
Cow position: | chr5:27683180-27682988 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 150 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 99, 26 |
Conread position: | 622-815 |
Cow position: | chr5:57366432-57366240 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 24, 18 |
Conread position: | 622-816 |
Cow position: | chr5:32733660-32733470 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 151 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 51, 109 |
Conread position: | 643-802 |
Cow position: | chr5:18653613-18653775 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 128 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 33, 143 |
Conread position: | 651-814 |
Cow position: | chr5:6589408-6589241 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 666-815 |
Cow position: | chr5:25001016-25000871 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 54, 17 |
Conread position: | 674-814 |
Cow position: | chr5:4088442-4088585 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 692-815 |
Cow position: | chr5:26069058-26068932 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.