Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010014H12.5 | 
| Conread position: | 228-604 | 
| Cow position: | chr6:7180879-7180497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 38, 46 | 
| Conread position: | 264-607 | 
| Cow position: | chr6:2885159-2885503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 21, 89 | 
| Conread position: | 363-608 | 
| Cow position: | chr6:37477130-37477375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 57, 82 | 
| Conread position: | 609-777 | 
| Cow position: | chr6:12093143-12092977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 108, 59 | 
| Conread position: | 609-800 | 
| Cow position: | chr6:63198426-63198235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 111, 53 | 
| Conread position: | 609-805 | 
| Cow position: | chr6:40314616-40314815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 98, 89 | 
| Conread position: | 609-808 | 
| Cow position: | chr6:62396882-62397076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 108, 46 | 
| Conread position: | 609-815 | 
| Cow position: | chr6:11353449-11353665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 609-815 | 
| Cow position: | chr6:37115851-37116062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 609-815 | 
| Cow position: | chr6:37642113-37642323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 23, 167 | 
| Conread position: | 609-815 | 
| Cow position: | chr6:42564657-42564867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:2885937-2886135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 64, 39 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:6476741-6476530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 59, 132 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:7179957-7179765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 114, 31 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:10054328-10054537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:13317770-13317561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 64, 42 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:16672100-16672310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:34203228-34203430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 40, 110 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:41552742-41552947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 108, 45 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:42723209-42723002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 62, 35 | 
| Conread position: | 609-816 | 
| Cow position: | chr6:59741335-59741125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 54 | 
| Conread position: | 610-791 | 
| Cow position: | chr6:64714830-64715015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-805 | 
| Cow position: | chr6:3278236-3278037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-805 | 
| Cow position: | chr6:55544612-55544413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:8201447-8201654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:8761586-8761378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:21686610-21686810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 134, 45 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:21971388-21971596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:27468973-27469174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 141, 41 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:29311210-29311413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 112, 30 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:30275468-30275256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:34893295-34893087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:35877002-35876796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 109, 56 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:36525757-36525965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:40554869-40554670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 112, 32 | 
| Conread position: | 610-814 | 
| Cow position: | chr6:47043717-47043509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 610-815 | 
| Cow position: | chr6:20496418-20496623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 110, 45 | 
| Conread position: | 610-815 | 
| Cow position: | chr6:33388551-33388757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 32, 53 | 
| Conread position: | 610-816 | 
| Cow position: | chr6:38231989-38232199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 20, 192 | 
| Conread position: | 610-816 | 
| Cow position: | chr6:52804130-52804332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 66, 88 | 
| Conread position: | 611-806 | 
| Cow position: | chr6:43617432-43617631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 611-814 | 
| Cow position: | chr6:331750-331546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 611-814 | 
| Cow position: | chr6:26671145-26670941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 60, 40 | 
| Conread position: | 611-814 | 
| Cow position: | chr6:44150842-44150634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 611-814 | 
| Cow position: | chr6:68026498-68026704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 59, 51 | 
| Conread position: | 611-816 | 
| Cow position: | chr6:65900194-65899994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 106, 45 | 
| Conread position: | 613-774 | 
| Cow position: | chr6:40274976-40275141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 613-806 | 
| Cow position: | chr6:13943632-13943825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 58, 37 | 
| Conread position: | 613-806 | 
| Cow position: | chr6:39907867-39908064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 613-809 | 
| Cow position: | chr6:44028768-44028964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 107, 45 | 
| Conread position: | 613-814 | 
| Cow position: | chr6:10640848-10641047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 140, 48 | 
| Conread position: | 613-814 | 
| Cow position: | chr6:13978240-13978442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 58, 163 | 
| Conread position: | 613-814 | 
| Cow position: | chr6:27169294-27169499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 58, 159 | 
| Conread position: | 613-816 | 
| Cow position: | chr6:28491796-28491589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 613-816 | 
| Cow position: | chr6:59919561-59919354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 616-815 | 
| Cow position: | chr6:39161928-39162122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 104, 47 | 
| Conread position: | 618-805 | 
| Cow position: | chr6:6566335-6566526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 618-815 | 
| Cow position: | chr6:1384121-1383924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 43, 33 | 
| Conread position: | 619-810 | 
| Cow position: | chr6:65007567-65007752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 96, 39 | 
| Conread position: | 619-814 | 
| Cow position: | chr6:701677-701877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 619-814 | 
| Cow position: | chr6:15280819-15280620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 619-816 | 
| Cow position: | chr6:10558922-10558737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 105, 41 | 
| Conread position: | 619-816 | 
| Cow position: | chr6:19453652-19453847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 100, 44 | 
| Conread position: | 619-816 | 
| Cow position: | chr6:49520667-49520475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 99, 25 | 
| Conread position: | 621-815 | 
| Cow position: | chr6:62488454-62488256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 93, 38 | 
| Conread position: | 622-806 | 
| Cow position: | chr6:13103785-13103972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 48, 77 | 
| Conread position: | 622-806 | 
| Cow position: | chr6:57870277-57870089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 49, 156 | 
| Conread position: | 622-809 | 
| Cow position: | chr6:28063068-28063254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 95, 43 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:1405510-1405316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 47, 168 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:2374433-2374626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 49, 67 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:2554434-2554630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:7141745-7141549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:17598550-17598357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 49, 29 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:34127078-34127271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 49, 66 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:42927113-42927306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 57, 41 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:45671991-45672187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:58409183-58408990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 49, 66 | 
| Conread position: | 622-814 | 
| Cow position: | chr6:65822400-65822204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 623-815 | 
| Cow position: | chr6:15476014-15476206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 94, 30 | 
| Conread position: | 623-816 | 
| Cow position: | chr6:68362588-68362395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 54, 37 | 
| Conread position: | 624-814 | 
| Cow position: | chr6:50497730-50497536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 627-815 | 
| Cow position: | chr6:42359950-42359756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 628-814 | 
| Cow position: | chr6:65841327-65841517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 628-816 | 
| Cow position: | chr6:1100853-1100662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 33, 155 | 
| Conread position: | 632-813 | 
| Cow position: | chr6:3889743-3889558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 644-816 | 
| Cow position: | chr6:13276551-13276727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 644-816 | 
| Cow position: | chr6:33459612-33459789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 648-814 | 
| Cow position: | chr6:28474461-28474624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 72, 57 | 
| Conread position: | 649-815 | 
| Cow position: | chr6:35420826-35420661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 24, 39 | 
| Conread position: | 651-790 | 
| Cow position: | chr6:16051642-16051785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 654-806 | 
| Cow position: | chr6:48368152-48368306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 684-816 | 
| Cow position: | chr6:8019869-8020001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 63, 96 | 
Show alignments to all cow chromosomes.
