Cow genome map

Conread name: Ss1.1-Lng1-LNG010014H12.5

Conread position: 33-595
Cow position: chr7:1737885-1737329 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 363
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 62, 167

Conread position: 43-235
Cow position: chr7:1738318-1738124 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 143

Conread position: 121-613
Cow position: chr7:60858594-60858114 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 317
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 234, 35

Conread position: 141-469
Cow position: chr7:1738074-1737746 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 51

Conread position: 394-610
Cow position: chr7:23450261-23450043 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 91

Conread position: 597-816
Cow position: chr7:60857572-60857356 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 52

Conread position: 609-790
Cow position: chr7:41870125-41869942 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 46

Conread position: 609-790
Cow position: chr7:55280995-55280815 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 113, 51

Conread position: 609-807
Cow position: chr7:3729782-3729981 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 52

Conread position: 609-808
Cow position: chr7:20306987-20306786 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 172

Conread position: 609-808
Cow position: chr7:62679851-62679640 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 166

Conread position: 609-808
Cow position: chr7:63020656-63020859 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 609-814
Cow position: chr7:27125973-27126175 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 145, 53

Conread position: 609-814
Cow position: chr7:33406440-33406230 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 609-815
Cow position: chr7:102796-102589 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 66

Conread position: 609-815
Cow position: chr7:23835925-23836135 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 74, 57

Conread position: 609-815
Cow position: chr7:58378392-58378182 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 134

Conread position: 609-815
Cow position: chr7:59136236-59136437 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 107

Conread position: 609-815
Cow position: chr7:67426222-67426430 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 609-816
Cow position: chr7:994038-994248 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 63, 57

Conread position: 609-816
Cow position: chr7:21975932-21975723 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 609-816
Cow position: chr7:49290399-49290610 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 20

Conread position: 609-816
Cow position: chr7:67416847-67417057 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 610-794
Cow position: chr7:8145433-8145248 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 610-796
Cow position: chr7:24056095-24056279 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 39

Conread position: 610-806
Cow position: chr7:21985203-21985403 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position: chr7:446829-446619 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 610-814
Cow position: chr7:1372845-1372640 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 41

Conread position: 610-814
Cow position: chr7:3301350-3301142 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position: chr7:14139792-14139584 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 61, 168

Conread position: 610-814
Cow position: chr7:21127846-21127645 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 45

Conread position: 610-814
Cow position: chr7:21235207-21234999 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position: chr7:24808664-24808455 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 610-814
Cow position: chr7:67798656-67798862 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 610-816
Cow position: chr7:5662180-5662394 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 610-816
Cow position: chr7:6489504-6489296 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 53

Conread position: 611-806
Cow position: chr7:11446361-11446558 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 167

Conread position: 611-815
Cow position: chr7:1405625-1405424 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 24

Conread position: 612-814
Cow position: chr7:19925005-19924802 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 39

Conread position: 612-814
Cow position: chr7:34485716-34485920 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 118

Conread position: 613-806
Cow position: chr7:27102303-27102110 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 58, 75

Conread position: 613-814
Cow position: chr7:6643065-6642866 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 56

Conread position: 613-814
Cow position: chr7:6648847-6648643 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 613-814
Cow position: chr7:25439337-25439531 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 50

Conread position: 613-814
Cow position: chr7:61559020-61559225 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 613-815
Cow position: chr7:1449302-1449498 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 31

Conread position: 613-816
Cow position: chr7:48633213-48633410 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 50

Conread position: 615-816
Cow position: chr7:26883937-26884144 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 616-816
Cow position: chr7:38536334-38536530 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 33

Conread position: 619-783
Cow position: chr7:26890619-26890782 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 96, 53

Conread position: 619-785
Cow position: chr7:21241979-21241813 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 21

Conread position: 619-796
Cow position: chr7:522031-521850 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 619-814
Cow position: chr7:17059-16860 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 619-814
Cow position: chr7:54602664-54602863 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 619-816
Cow position: chr7:1357854-1357667 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 43

Conread position: 619-816
Cow position: chr7:3154595-3154794 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 83

Conread position: 619-816
Cow position: chr7:35287744-35287546 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 43

Conread position: 619-816
Cow position: chr7:36085148-36085349 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 178

Conread position: 619-816
Cow position: chr7:68436232-68436031 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 620-806
Cow position: chr7:7257022-7257212 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 622-806
Cow position: chr7:20528858-20528671 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 41

Conread position: 622-806
Cow position: chr7:20799615-20799438 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 36

Conread position: 622-814
Cow position: chr7:3234867-3234671 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position: chr7:23816151-23815958 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 36

Conread position: 622-814
Cow position: chr7:26025852-26026051 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 622-814
Cow position: chr7:46902260-46902064 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position: chr7:47374813-47375009 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 622-816
Cow position: chr7:21310024-21310223 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 27

Conread position: 623-816
Cow position: chr7:52120263-52120065 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 624-806
Cow position: chr7:20555536-20555718 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 44

Conread position: 624-814
Cow position: chr7:21319974-21320168 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 625-795
Cow position: chr7:41489938-41490110 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 627-816
Cow position: chr7:29469688-29469878 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 36

Conread position: 629-816
Cow position: chr7:1400537-1400345 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 107

Conread position: 631-807
Cow position: chr7:750758-750935 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 66

Conread position: 631-815
Cow position: chr7:67811949-67812135 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 8

Conread position: 633-813
Cow position: chr7:24421664-24421843 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 22

Conread position: 639-816
Cow position: chr7:47050536-47050715 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 646-815
Cow position: chr7:65496956-65496786 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 134

Conread position: 651-816
Cow position: chr7:545059-545224 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 127

Conread position: 651-816
Cow position: chr7:26925188-26925023 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 11

Conread position: 657-814
Cow position: chr7:68479018-68479179 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 673-816
Cow position: chr7:29370711-29370564 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 692-816
Cow position: chr7:20106402-20106277 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 107
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 692-816
Cow position: chr7:60460696-60460570 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 120

Conread position: 695-815
Cow position: chr7:1736015-1735896 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 24

Show alignments to all cow chromosomes.