Cow genome map

Conread name: Ss1.1-Lng1-LNG010014H12.5

Conread position: 56-609
Cow position:
Alignm length: 562
Alignm identity: 338
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 58

Conread position: 69-469
Cow position:
Alignm length: 408
Alignm identity: 274
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 125

Conread position: 121-476
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 15, 73

Conread position: 121-609
Cow position:
Alignm length: 512
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 22

Conread position: 321-492
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 602-763
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 8

Conread position: 608-815
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 29

Conread position: 608-816
Cow position:
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 608-816
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 112, 45

Conread position: 609-779
Cow position:
Alignm length: 175
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 169

Conread position: 609-795
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 67, 0

Conread position: 609-809
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 101

Conread position: 609-814
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 47

Conread position: 609-815
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 98

Conread position: 609-815
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 189

Conread position: 609-816
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 46

Conread position: 609-816
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 108, 51

Conread position: 609-816
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 110, 46

Conread position: 609-816
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 54

Conread position: 609-816
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 139

Conread position: 609-816
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 61

Conread position: 609-816
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 64, 53

Conread position: 609-816
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 609-816
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 51

Conread position: 609-816
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 46

Conread position: 609-816
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 178

Conread position: 609-816
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 609-816
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 64, 51

Conread position: 609-816
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 46

Conread position: 610-777
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 610-797
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 610-805
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 610-806
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 61, 118

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 41

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 0

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 162

Conread position: 610-814
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 610-814
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 55

Conread position: 610-816
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 163

Conread position: 610-816
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 62

Conread position: 610-816
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 197

Conread position: 611-806
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 51

Conread position: 611-806
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 159

Conread position: 611-806
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 611-806
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 611-806
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 35, 127

Conread position: 611-814
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 611-814
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 611-814
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 611-814
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 14

Conread position: 611-814
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 611-814
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 611-814
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 60, 117

Conread position: 611-815
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 47

Conread position: 611-815
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 61

Conread position: 611-816
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 61

Conread position: 613-806
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 38

Conread position: 613-806
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 613-814
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 43

Conread position: 613-814
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 104, 45

Conread position: 613-814
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 107

Conread position: 613-814
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 613-814
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 613-814
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 613-814
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 75

Conread position: 613-814
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 21

Conread position: 613-814
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 74

Conread position: 613-814
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 613-814
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 173

Conread position: 613-815
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 38

Conread position: 613-816
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 97

Conread position: 613-816
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 618-778
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 619-796
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 32

Conread position: 619-803
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 83

Conread position: 619-806
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 93

Conread position: 619-807
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 619-814
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 619-814
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 98, 20

Conread position: 619-815
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 47

Conread position: 619-816
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 619-816
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 44

Conread position: 622-793
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 152

Conread position: 622-806
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 34

Conread position: 622-806
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 36

Conread position: 622-806
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 36

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 98, 41

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 47, 117

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 109

Conread position: 622-814
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 36

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 98, 36

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 36, 47

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 622-814
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 38

Conread position: 622-814
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 165

Conread position: 622-814
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 622-815
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 36

Conread position: 622-816
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 41

Conread position: 622-816
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 40

Conread position: 623-814
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 32

Conread position: 624-814
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 624-814
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 626-815
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 19, 154

Conread position: 630-806
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 630-814
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 630-815
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 79

Conread position: 630-816
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 631-814
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 18

Conread position: 631-816
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 638-814
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 33, 50

Conread position: 640-806
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 643-815
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 23

Conread position: 644-816
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 132

Conread position: 645-816
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 135

Conread position: 648-815
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 80

Conread position: 649-816
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 655-815
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 121

Conread position: 666-814
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 672-814
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 73

Show alignments to all cow chromosomes.