Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 1-317 |
| Cow position: | chr11:77729289-77728951 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 4-316 |
| Cow position: | chr11:9416416-9416117 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 24-317 |
| Cow position: | chr11:9158154-9157851 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 24-317 |
| Cow position: | chr11:72110697-72110386 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 25-169 |
| Cow position: | chr11:2337259-2337410 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 25-233 |
| Cow position: | chr11:38006062-38005837 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 25-294 |
| Cow position: | chr11:49076404-49076126 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 25-316 |
| Cow position: | chr11:29234381-29234074 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 38-316 |
| Cow position: | chr11:10218278-10217986 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 143, 10 |
| Conread position: | 41-315 |
| Cow position: | chr11:30125957-30125674 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 116, 91 |
| Conread position: | 52-317 |
| Cow position: | chr11:26125640-26125356 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 235 |
| Conread position: | 52-317 |
| Cow position: | chr11:29669341-29669054 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 238 |
| Conread position: | 52-317 |
| Cow position: | chr11:43515345-43515056 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 240 |
| Conread position: | 54-317 |
| Cow position: | chr11:30186394-30186666 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 54-318 |
| Cow position: | chr11:36761386-36761669 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 57-293 |
| Cow position: | chr11:12093054-12093302 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 201 |
| Conread position: | 65-316 |
| Cow position: | chr11:33044815-33044547 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 74-317 |
| Cow position: | chr11:30304577-30304820 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 177, 98 |
| Conread position: | 124-316 |
| Cow position: | chr11:44230499-44230702 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 576-710 |
| Cow position: | chr11:10217995-10217865 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 576-756 |
| Cow position: | chr11:13067446-13067264 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 111 |
| Conread position: | 576-756 |
| Cow position: | chr11:13162558-13162740 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 79, 111 |
Show alignments to all cow chromosomes.