Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010019C07.5
        

               Conread position:
               24-317
               

               Cow position:
               chr13:31613007-31612695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               31-316
               

               Cow position:
               chr13:22186384-22186083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               52-316
               

               Cow position:
               chr13:34048002-34048256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               226, 105
               

               Conread position:
               52-317
               

               Cow position:
               chr13:3654952-3654670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 233
               

               Conread position:
               59-317
               

               Cow position:
               chr13:2232034-2232300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               193, 124
               

               Conread position:
               59-317
               

               Cow position:
               chr13:2909083-2908808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               74-316
               

               Cow position:
               chr13:32525358-32525105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               82-317
               

               Cow position:
               chr13:33928166-33927922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               107-316
               

               Cow position:
               chr13:60701857-60701637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.