Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 24-314 |
| Cow position: | chr2:53328841-53329148 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 148, 26 |
| Conread position: | 24-317 |
| Cow position: | chr2:47810114-47810414 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 148, 27 |
| Conread position: | 24-326 |
| Cow position: | chr2:976182-975861 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 143, 24 |
| Conread position: | 25-315 |
| Cow position: | chr2:11724928-11725246 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 25-316 |
| Cow position: | chr2:20904034-20903736 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 131, 214 |
| Conread position: | 25-316 |
| Cow position: | chr2:43958719-43959021 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 145 |
| Conread position: | 26-316 |
| Cow position: | chr2:34475789-34475487 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 26-319 |
| Cow position: | chr2:77207765-77208067 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 27-316 |
| Cow position: | chr2:51305802-51305506 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 146, 25 |
| Conread position: | 33-316 |
| Cow position: | chr2:45969367-45969098 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 218, 95 |
| Conread position: | 52-265 |
| Cow position: | chr2:15578536-15578315 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 52-305 |
| Cow position: | chr2:22076910-22077179 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 234 |
| Conread position: | 52-316 |
| Cow position: | chr2:75250889-75251157 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 110, 41 |
| Conread position: | 52-317 |
| Cow position: | chr2:78761604-78761878 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 54-316 |
| Cow position: | chr2:15580869-15580584 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 126, 200 |
| Conread position: | 57-317 |
| Cow position: | chr2:2102332-2102065 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 59-316 |
| Cow position: | chr2:85356644-85356367 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 60-317 |
| Cow position: | chr2:5481510-5481239 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 92, 222 |
| Conread position: | 61-317 |
| Cow position: | chr2:52655599-52655872 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 29 |
| Conread position: | 62-316 |
| Cow position: | chr2:4235311-4235578 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 77-317 |
| Cow position: | chr2:36991035-36991291 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 74, 136 |
| Conread position: | 111-316 |
| Cow position: | chr2:11691383-11691596 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 576-727 |
| Cow position: | chr2:50402667-50402827 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 45 |
| Conread position: | 576-736 |
| Cow position: | chr2:45921854-45921692 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 119 |
| Conread position: | 576-752 |
| Cow position: | chr2:4235569-4235752 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 576-756 |
| Cow position: | chr2:11691587-11691770 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 576-756 |
| Cow position: | chr2:15580593-15580398 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 576-756 |
| Cow position: | chr2:67430441-67430624 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 576-757 |
| Cow position: | chr2:52173925-52173738 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 78, 151 |
| Conread position: | 576-758 |
| Cow position: | chr2:34475496-34475316 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 577-756 |
| Cow position: | chr2:77208056-77208231 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 134, 11 |
Show alignments to all cow chromosomes.