Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010019C07.5
        

               Conread position:
               3-316
               

               Cow position:
               chr22:13737910-13737584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               30, 134
               

               Conread position:
               25-220
               

               Cow position:
               chr22:8873427-8873634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               27-192
               

               Cow position:
               chr22:41237112-41237283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               39-317
               

               Cow position:
               chr22:41474766-41474473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               37, 268
               

               Conread position:
               52-317
               

               Cow position:
               chr22:44395359-44395644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 73
               

               Conread position:
               54-311
               

               Cow position:
               chr22:293574-293305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               78-316
               

               Cow position:
               chr22:36736377-36736625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               79-317
               

               Cow position:
               chr22:871232-870993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               116, 96
               

               Conread position:
               576-701
               

               Cow position:
               chr22:34606916-34607044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               577-705
               

               Cow position:
               chr22:33351023-33351154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-755
               

               Cow position:
               chr22:307463-307644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 102
               

               Conread position:
               584-699
               

               Cow position:
               chr22:293295-293178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 15
               
Show alignments to all cow chromosomes.