Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 3-185 |
| Cow position: | chr28:24667191-24667367 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 24-317 |
| Cow position: | chr28:17388076-17388389 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 25-317 |
| Cow position: | chr28:15584986-15585298 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 52-189 |
| Cow position: | chr28:2083225-2083357 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 52-317 |
| Cow position: | chr28:3193154-3192883 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 102 |
| Conread position: | 52-317 |
| Cow position: | chr28:5565482-5565769 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 100, 238 |
| Conread position: | 52-317 |
| Cow position: | chr28:13459595-13459879 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 52-317 |
| Cow position: | chr28:13522348-13522635 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 232 |
| Conread position: | 52-317 |
| Cow position: | chr28:22261530-22261243 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 52-317 |
| Cow position: | chr28:33251965-33252225 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 192, 102 |
| Conread position: | 52-317 |
| Cow position: | chr28:34593464-34593751 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 54-194 |
| Cow position: | chr28:8783721-8783860 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 54-317 |
| Cow position: | chr28:10591739-10591469 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 127, 60 |
| Conread position: | 54-317 |
| Cow position: | chr28:29819193-29819478 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 236 |
| Conread position: | 56-260 |
| Cow position: | chr28:29437513-29437297 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 59-317 |
| Cow position: | chr28:2591551-2591824 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 59-317 |
| Cow position: | chr28:15681521-15681797 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 231 |
| Conread position: | 78-316 |
| Cow position: | chr28:7901006-7901258 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 576-706 |
| Cow position: | chr28:17311812-17311946 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 576-757 |
| Cow position: | chr28:18102036-18101851 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 87 |
Show alignments to all cow chromosomes.