Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 23-179 |
| Cow position: | chr4:62564564-62564723 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 24-149 |
| Cow position: | chr4:969722-969600 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 24-317 |
| Cow position: | chr4:3960879-3961188 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 24-317 |
| Cow position: | chr4:25600317-25600016 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 25-315 |
| Cow position: | chr4:6215268-6214958 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 39-316 |
| Cow position: | chr4:21338681-21338393 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 52-316 |
| Cow position: | chr4:3829805-3830077 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 120, 197 |
| Conread position: | 52-316 |
| Cow position: | chr4:22471519-22471784 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 52-316 |
| Cow position: | chr4:40824940-40824650 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 52-316 |
| Cow position: | chr4:54190184-54190450 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 52-317 |
| Cow position: | chr4:6491037-6490750 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 52-317 |
| Cow position: | chr4:36895683-36895970 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 238 |
| Conread position: | 54-316 |
| Cow position: | chr4:4175759-4176032 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 54-317 |
| Cow position: | chr4:43880421-43880705 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 235 |
| Conread position: | 59-185 |
| Cow position: | chr4:11617754-11617880 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-316 |
| Cow position: | chr4:6449548-6449297 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 80-315 |
| Cow position: | chr4:1497416-1497158 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 572-757 |
| Cow position: | chr4:15263405-15263212 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 576-699 |
| Cow position: | chr4:17530834-17530714 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 87, 98 |
| Conread position: | 576-756 |
| Cow position: | chr4:1497166-1496979 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 576-757 |
| Cow position: | chr4:6214966-6214777 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 156 |
| Conread position: | 576-757 |
| Cow position: | chr4:24198609-24198433 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 576-757 |
| Cow position: | chr4:40824659-40824472 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 578-786 |
| Cow position: | chr4:62565576-62565789 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 27 |
Show alignments to all cow chromosomes.