Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 24-316 |
| Cow position: | chr5:41359366-41359039 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-317 |
| Cow position: | chr5:45182721-45182419 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 253 |
| Conread position: | 24-317 |
| Cow position: | chr5:59282140-59282453 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 25-316 |
| Cow position: | chr5:58056363-58056046 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 88 |
| Conread position: | 25-318 |
| Cow position: | chr5:24109662-24109345 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 26-317 |
| Cow position: | chr5:57483168-57482856 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 51-315 |
| Cow position: | chr5:32674325-32674054 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 125, 246 |
| Conread position: | 52-293 |
| Cow position: | chr5:12682097-12681851 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 128, 223 |
| Conread position: | 52-316 |
| Cow position: | chr5:3504838-3504558 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 275 |
| Conread position: | 52-316 |
| Cow position: | chr5:6519303-6519576 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 52-317 |
| Cow position: | chr5:3785215-3785499 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 235 |
| Conread position: | 52-317 |
| Cow position: | chr5:64782613-64782326 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 238 |
| Conread position: | 58-301 |
| Cow position: | chr5:23716535-23716275 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 59-284 |
| Cow position: | chr5:52804745-52804981 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 224 |
| Conread position: | 59-317 |
| Cow position: | chr5:9686996-9686723 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 59-317 |
| Cow position: | chr5:26769224-26769501 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 59-317 |
| Cow position: | chr5:49181697-49181963 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 202 |
| Conread position: | 576-757 |
| Cow position: | chr5:49101315-49101493 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 576-757 |
| Cow position: | chr5:58334903-58334716 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 159 |
| Conread position: | 579-699 |
| Cow position: | chr5:57366338-57366215 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.