Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 3-174 |
| Cow position: | chr7:58378603-58378435 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 24-192 |
| Cow position: | chr7:30299746-30299918 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 24-305 |
| Cow position: | chr7:18962554-18962842 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 24-315 |
| Cow position: | chr7:27531256-27530943 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 114 |
| Conread position: | 24-316 |
| Cow position: | chr7:65497178-65496876 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 24-317 |
| Cow position: | chr7:20799814-20799520 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 25-316 |
| Cow position: | chr7:7297267-7296957 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 299 |
| Conread position: | 51-160 |
| Cow position: | chr7:25099797-25099905 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 52-315 |
| Cow position: | chr7:26890442-26890722 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 172 |
| Conread position: | 52-317 |
| Cow position: | chr7:1373014-1372730 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 52-317 |
| Cow position: | chr7:64242301-64242020 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 232 |
| Conread position: | 54-287 |
| Cow position: | chr7:68894956-68895198 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 54-316 |
| Cow position: | chr7:41876841-41876572 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 209 |
| Conread position: | 56-316 |
| Cow position: | chr7:30119899-30119616 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 59-303 |
| Cow position: | chr7:35297952-35297690 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 90-311 |
| Cow position: | chr7:68477773-68478006 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 133-315 |
| Cow position: | chr7:26850971-26851163 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 540-757 |
| Cow position: | chr7:68478327-68478550 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 190 |
| Conread position: | 576-698 |
| Cow position: | chr7:68084700-68084825 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 576-752 |
| Cow position: | chr7:23836034-23836215 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 82, 158 |
| Conread position: | 576-756 |
| Cow position: | chr7:26851155-26851338 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 162 |
| Conread position: | 576-757 |
| Cow position: | chr7:25101946-25102136 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 145 |
| Conread position: | 576-757 |
| Cow position: | chr7:67812034-67812225 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 158 |
| Conread position: | 576-772 |
| Cow position: | chr7:30119625-30119423 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 141 |
| Conread position: | 576-828 |
| Cow position: | chr7:41487495-41487759 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 73 |
Show alignments to all cow chromosomes.