Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010019C07.5 |
| Conread position: | 2-316 |
| Cow position: | chr9:3155466-3155793 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 24-316 |
| Cow position: | chr9:42309131-42309443 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 25-179 |
| Cow position: | chr9:29327480-29327638 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 44-316 |
| Cow position: | chr9:3868033-3867743 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 51-317 |
| Cow position: | chr9:31807014-31807299 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 225 |
| Conread position: | 52-316 |
| Cow position: | chr9:23409700-23409974 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 129, 59 |
| Conread position: | 52-316 |
| Cow position: | chr9:54994777-54995043 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 201, 62 |
| Conread position: | 52-317 |
| Cow position: | chr9:29629272-29628985 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 120, 238 |
| Conread position: | 54-316 |
| Cow position: | chr9:59510078-59510367 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 57-316 |
| Cow position: | chr9:12846043-12845778 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 57-317 |
| Cow position: | chr9:8166523-8166256 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 62-316 |
| Cow position: | chr9:64158614-64158884 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 78-316 |
| Cow position: | chr9:3394799-3394550 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 95, 146 |
| Conread position: | 83-316 |
| Cow position: | chr9:3024619-3024859 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 94, 162 |
| Conread position: | 97-315 |
| Cow position: | chr9:11519268-11519045 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 154, 121 |
| Conread position: | 567-737 |
| Cow position: | chr9:23409956-23410131 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 576-711 |
| Cow position: | chr9:3024850-3024987 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 100 |
Show alignments to all cow chromosomes.