Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010020E08.5 |
| Conread position: | 96-171 |
| Cow position: | chr3:25700224-25700149 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 70 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-171 |
| Cow position: | chr3:25779546-25779471 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 70 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-321 |
| Cow position: | chr3:25778698-25778593 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-321 |
| Cow position: | chr3:25715197-25715097 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-321 |
| Cow position: | chr3:25733659-25733559 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-321 |
| Cow position: | chr3:25744564-25744471 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-320 |
| Cow position: | chr3:25699051-25698969 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-423 |
| Cow position: | chr3:25698883-25698779 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-423 |
| Cow position: | chr3:25715000-25714896 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 319-423 |
| Cow position: | chr3:25733463-25733359 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 319-423 |
| Cow position: | chr3:25744374-25744270 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 413-519 |
| Cow position: | chr3:25697989-25697883 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-515 |
| Cow position: | chr3:25714154-25714059 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-515 |
| Cow position: | chr3:25732616-25732521 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-515 |
| Cow position: | chr3:25743629-25743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 420-515 |
| Cow position: | chr3:25777296-25777201 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-625 |
| Cow position: | chr3:25768170-25768059 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-627 |
| Cow position: | chr3:25671052-25671165 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-627 |
| Cow position: | chr3:25697802-25697689 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-627 |
| Cow position: | chr3:25713973-25713860 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-627 |
| Cow position: | chr3:25732435-25732322 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-627 |
| Cow position: | chr3:25743447-25743334 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-627 |
| Cow position: | chr3:25777115-25777002 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 625-784 |
| Cow position: | chr3:25773967-25773801 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 625-875 |
| Cow position: | chr3:25724925-25724665 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 95 |
| Conread position: | 625-884 |
| Cow position: | chr3:25683446-25683178 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 625-885 |
| Cow position: | chr3:25706201-25705932 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 96 |
| Conread position: | 625-885 |
| Cow position: | chr3:25737512-25737241 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 96 |
Show alignments to all cow chromosomes.