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Cow genome map

           
Conread name:
           
Ss1.1-Lng1-LNG010020H11.5
        

               
Conread position:
               
77-361
               

               
Cow position:
               
chr12:42604444-42604754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
93-361
               

               
Cow position:
               
chr12:44766552-44766261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
96-361
               

               
Cow position:
               
chr12:38774799-38774519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
108-332
               

               
Cow position:
               
chr12:17982092-17981858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
109-346
               

               
Cow position:
               
chr12:10490767-10490511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
109-358
               

               
Cow position:
               
chr12:8718662-8718931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
110-334
               

               
Cow position:
               
chr12:20317049-20317293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
111-368
               

               
Cow position:
               
chr12:12177531-12177809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
119-363
               

               
Cow position:
               
chr12:564956-564700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr12:35163480-35163264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
120-359
               

               
Cow position:
               
chr12:2511700-2511960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
120-361
               

               
Cow position:
               
chr12:32146933-32147199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 147
               

               
Conread position:
               
120-361
               

               
Cow position:
               
chr12:40306967-40306704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 222
               

               
Conread position:
               
120-361
               

               
Cow position:
               
chr12:41185267-41185000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
120-365
               

               
Cow position:
               
chr12:8970316-8970587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
120-365
               

               
Cow position:
               
chr12:35135989-35135723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 169
               

               
Conread position:
               
120-369
               

               
Cow position:
               
chr12:1511068-1511344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
120-369
               

               
Cow position:
               
chr12:27435468-27435745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
120-426
               

               
Cow position:
               
chr12:24981404-24981062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
122-358
               

               
Cow position:
               
chr12:11582844-11582594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr12:23475442-23475181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
123-315
               

               
Cow position:
               
chr12:26223677-26223887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr12:7873066-7872853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr12:27455131-27455344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr12:34514196-34514408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 177
               

               
Conread position:
               
123-319
               

               
Cow position:
               
chr12:40270914-40271128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr12:2967615-2967401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-325
               

               
Cow position:
               
chr12:25435250-25435036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-325
               

               
Cow position:
               
chr12:37843562-37843786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr12:62907-62675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 190
               

               
Conread position:
               
123-353
               

               
Cow position:
               
chr12:28704671-28704419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
123-357
               

               
Cow position:
               
chr12:1437072-1437331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-358
               

               
Cow position:
               
chr12:10227435-10227175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-358
               

               
Cow position:
               
chr12:14424051-14423790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
123-359
               

               
Cow position:
               
chr12:17718990-17718731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-359
               

               
Cow position:
               
chr12:22480811-22480557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
123-359
               

               
Cow position:
               
chr12:27851960-27852218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-359
               

               
Cow position:
               
chr12:43681698-43681437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-360
               

               
Cow position:
               
chr12:249628-249889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
123-360
               

               
Cow position:
               
chr12:10931777-10931517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:464916-465180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:550919-551183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:1055815-1056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:1406141-1405877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:1865213-1865477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:3181103-3180839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:3364581-3364317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:3545346-3545082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:3716582-3716843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:5800474-5800209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:5905218-5904962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:6404093-6404357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:7651146-7651404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 134
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:8172599-8172335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:8542185-8542445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:8770455-8770192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:8839948-8839684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:9886313-9886579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:10076352-10076088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:10359388-10359127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
49, 168
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:10790552-10790816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:12788061-12788325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:13042546-13042811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:14214755-14214491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:14568130-14568394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:14940659-14940395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:15719876-15720136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:15925059-15925323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:17786947-17787211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:18116094-18115833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 168
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:18724445-18724181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:20218190-20217928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:21672240-21672504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:22201987-22202251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:22286241-22286505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 150
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:22979199-22979463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:23137634-23137898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:25838978-25838713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:26268522-26268786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:26333415-26333151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:27929032-27929296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:28707931-28708193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 170
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:28763321-28763585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:30011277-30011536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 185
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:30016384-30016643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 185
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:31027126-31027390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:31328636-31328899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 158
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:32700459-32700195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:32900458-32900722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:32918021-32917760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 184
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:34365883-34365619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:39610714-39610975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 249
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:39930859-39930595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:40868027-40867763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:41337535-41337802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:43533781-43533517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:44758117-44757853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-361
               

               
Cow position:
               
chr12:46111423-46111687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
123-369
               

               
Cow position:
               
chr12:4965143-4965417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
123-369
               

               
Cow position:
               
chr12:32758388-32758117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
123-376
               

               
Cow position:
               
chr12:21665832-21665552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 270
               

               
Conread position:
               
123-385
               

               
Cow position:
               
chr12:35368072-35367787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 169
               

               
Conread position:
               
124-337
               

               
Cow position:
               
chr12:1345815-1345588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 198
               

               
Conread position:
               
124-357
               

               
Cow position:
               
chr12:32340486-32340226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-358
               

               
Cow position:
               
chr12:1007710-1007449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:8673756-8674021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:11101942-11101678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:12928216-12928480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:21250621-21250884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:25147924-25148188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:25265642-25265903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:32088924-32088669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
124-361
               

               
Cow position:
               
chr12:47415495-47415235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
124-363
               

               
Cow position:
               
chr12:19873250-19872997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 199
               

               
Conread position:
               
124-365
               

               
Cow position:
               
chr12:22748910-22748642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-366
               

               
Cow position:
               
chr12:21202500-21202255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
124-397
               

               
Cow position:
               
chr12:29909336-29909637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
6, 265
               

               
Conread position:
               
124-445
               

               
Cow position:
               
chr12:37832343-37831998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 268
               

               
Conread position:
               
125-325
               

               
Cow position:
               
chr12:35311240-35311458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
125-361
               

               
Cow position:
               
chr12:6186459-6186719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 166
               

               
Conread position:
               
125-361
               

               
Cow position:
               
chr12:21718481-21718742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
125-361
               

               
Cow position:
               
chr12:25260060-25260322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr12:47485974-47485764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
126-325
               

               
Cow position:
               
chr12:6695575-6695354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr12:24028792-24029052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr12:27505959-27506219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
126-363
               

               
Cow position:
               
chr12:21212475-21212211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
126-363
               

               
Cow position:
               
chr12:30502310-30502061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
126-365
               

               
Cow position:
               
chr12:48416062-48416316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 186
               

               
Conread position:
               
127-358
               

               
Cow position:
               
chr12:6530282-6530024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:5226921-5226664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:6491650-6491882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
190, 47
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:21579095-21579356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:28012541-28012801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:30593420-30593676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
128-361
               

               
Cow position:
               
chr12:15821406-15821151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
128-368
               

               
Cow position:
               
chr12:21497231-21497476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr12:37697788-37698043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr12:4004289-4004475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr12:1855253-1855425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr12:7674508-7674336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr12:2229177-2229001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr12:18297266-18297090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr12:21452371-21452547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr12:35459365-35459189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
195-361
               

               
Cow position:
               
chr12:31533235-31533415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
198-361
               

               
Cow position:
               
chr12:27994704-27994531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
199-325
               

               
Cow position:
               
chr12:11558543-11558669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
199-347
               

               
Cow position:
               
chr12:24755947-24756095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 138
               

               
Conread position:
               
199-359
               

               
Cow position:
               
chr12:19851686-19851522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr12:34177154-34176985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
200-361
               

               
Cow position:
               
chr12:40514717-40514547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr12:5713558-5713397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr12:29499092-29499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr12:41973179-41973343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
202-349
               

               
Cow position:
               
chr12:15231622-15231469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
203-361
               

               
Cow position:
               
chr12:15939286-15939448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
216-312
               

               
Cow position:
               
chr12:34965027-34964931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-313
               

               
Cow position:
               
chr12:27054932-27054836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
216-314
               

               
Cow position:
               
chr12:19693638-19693736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-325
               

               
Cow position:
               
chr12:27987056-27987165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
216-332
               

               
Cow position:
               
chr12:26777822-26777941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
216-336
               

               
Cow position:
               
chr12:42060559-42060440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
216-356
               

               
Cow position:
               
chr12:32849143-32849000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
216-357
               

               
Cow position:
               
chr12:7885292-7885434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
216-359
               

               
Cow position:
               
chr12:18586253-18586105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
216-360
               

               
Cow position:
               
chr12:1093482-1093331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:5273787-5273934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:10988935-10988785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:12754585-12754727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:20459141-20459292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:22517268-22517424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:23039695-23039846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:24658139-24658282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:27957944-27958095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:46104756-46104907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
216-361
               

               
Cow position:
               
chr12:47928673-47928529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
216-363
               

               
Cow position:
               
chr12:20312824-20312967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
216-363
               

               
Cow position:
               
chr12:24558153-24558004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
216-363
               

               
Cow position:
               
chr12:25365444-25365594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
216-365
               

               
Cow position:
               
chr12:17663531-17663375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
216-365
               

               
Cow position:
               
chr12:19453110-19452957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
216-365
               

               
Cow position:
               
chr12:21557528-21557373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
216-365
               

               
Cow position:
               
chr12:25313132-25313287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
216-366
               

               
Cow position:
               
chr12:21611178-21611028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
110, 89
               

               
Conread position:
               
216-366
               

               
Cow position:
               
chr12:48436082-48436237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
216-372
               

               
Cow position:
               
chr12:26869671-26869828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 126
               

               
Conread position:
               
216-376
               

               
Cow position:
               
chr12:41737264-41737427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr12:6105788-6105968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
217-336
               

               
Cow position:
               
chr12:16465480-16465355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
217-361
               

               
Cow position:
               
chr12:19198596-19198464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
217-361
               

               
Cow position:
               
chr12:32011197-32011347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
217-364
               

               
Cow position:
               
chr12:33297209-33297057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
218-361
               

               
Cow position:
               
chr12:16301759-16301908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
218-361
               

               
Cow position:
               
chr12:22594331-22594184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
219-363
               

               
Cow position:
               
chr12:5539644-5539789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
220-363
               

               
Cow position:
               
chr12:28840386-28840238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
225-363
               

               
Cow position:
               
chr12:15259390-15259530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
228-358
               

               
Cow position:
               
chr12:6686505-6686368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
232-361
               

               
Cow position:
               
chr12:36149108-36149243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
233-365
               

               
Cow position:
               
chr12:28571936-28571802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
235-361
               

               
Cow position:
               
chr12:8841493-8841628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
246-365
               

               
Cow position:
               
chr12:24206081-24205956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               
Show alignments to all cow chromosomes.