Cow genome map

Conread name: Ss1.1-Lng1-LNG010020H11.5

Conread position: 5-361
Cow position: chr16:14570696-14570340 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 95

Conread position: 7-361
Cow position: chr16:7042791-7043184 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 100-359
Cow position: chr16:15495488-15495203 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 53

Conread position: 105-361
Cow position: chr16:52952209-52952492 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 107-361
Cow position: chr16:49515756-49516033 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 12

Conread position: 108-361
Cow position: chr16:30143941-30144203 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 25

Conread position: 109-361
Cow position: chr16:17142425-17142152 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 204

Conread position: 110-361
Cow position: chr16:27538040-27537762 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 112-361
Cow position: chr16:25483855-25483584 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 62, 179

Conread position: 112-361
Cow position: chr16:40293146-40293422 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 119-319
Cow position: chr16:41753097-41753313 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 7

Conread position: 119-363
Cow position: chr16:43894246-43894515 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 151

Conread position: 120-334
Cow position: chr16:30516412-30516647 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 120-336
Cow position: chr16:44475342-44475579 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 120-345
Cow position: chr16:42849164-42849416 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 47

Conread position: 120-359
Cow position: chr16:840285-840020 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 120-361
Cow position: chr16:2960694-2960427 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 120-361
Cow position: chr16:4972542-4972779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 74

Conread position: 120-361
Cow position: chr16:6677732-6677469 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 187

Conread position: 120-361
Cow position: chr16:15369990-15369739 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 36

Conread position: 120-361
Cow position: chr16:25880330-25880064 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 120-364
Cow position: chr16:5756950-5756684 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 120-367
Cow position: chr16:15424750-15425023 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 122-361
Cow position: chr16:26627764-26627500 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 122-361
Cow position: chr16:41163765-41164026 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 133

Conread position: 123-313
Cow position: chr16:30801304-30801094 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 123-314
Cow position: chr16:37924682-37924872 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 123-314
Cow position: chr16:52855853-52856064 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 123-316
Cow position: chr16:23654261-23654048 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 123-316
Cow position: chr16:25329285-25329498 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-316
Cow position: chr16:26133165-26133377 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 33

Conread position: 123-316
Cow position: chr16:27064387-27064600 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 123-316
Cow position: chr16:49094092-49094299 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 48

Conread position: 123-321
Cow position: chr16:15754929-15755146 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 160

Conread position: 123-325
Cow position: chr16:3338390-3338166 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 123-325
Cow position: chr16:34533428-34533221 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 126

Conread position: 123-326
Cow position: chr16:7701787-7701563 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 57

Conread position: 123-332
Cow position: chr16:29379740-29379515 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 123-332
Cow position: chr16:37053053-37053283 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-332
Cow position: chr16:42970450-42970682 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 123-334
Cow position: chr16:54703480-54703262 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 216

Conread position: 123-336
Cow position: chr16:10812894-10812660 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-345
Cow position: chr16:22124688-22124935 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 157

Conread position: 123-350
Cow position: chr16:54322398-54322651 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 123-351
Cow position: chr16:25088654-25088408 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 224

Conread position: 123-355
Cow position: chr16:49253256-49253507 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 165

Conread position: 123-357
Cow position: chr16:25043059-25042808 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 227

Conread position: 123-357
Cow position: chr16:51641263-51640999 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 123-358
Cow position: chr16:2426091-2426352 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 123-358
Cow position: chr16:18650572-18650833 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-358
Cow position: chr16:18975880-18975619 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-358
Cow position: chr16:23772663-23772924 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-359
Cow position: chr16:3768996-3769258 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 123-359
Cow position: chr16:10866768-10866507 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-359
Cow position: chr16:48932936-48933193 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 123-360
Cow position: chr16:16540409-16540155 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 231

Conread position: 123-360
Cow position: chr16:23986325-23986062 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-360
Cow position: chr16:29191986-29192246 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 48

Conread position: 123-361
Cow position: chr16:192927-193190 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 49, 203

Conread position: 123-361
Cow position: chr16:825482-825221 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 154

Conread position: 123-361
Cow position: chr16:1563375-1563640 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 123-361
Cow position: chr16:1734748-1734487 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 168

Conread position: 123-361
Cow position: chr16:2480148-2480407 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 20

Conread position: 123-361
Cow position: chr16:2724212-2724476 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:2962845-2963109 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 123-361
Cow position: chr16:3148029-3148291 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 147

Conread position: 123-361
Cow position: chr16:4722490-4722227 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 139

Conread position: 123-361
Cow position: chr16:4757020-4756758 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 48

Conread position: 123-361
Cow position: chr16:5345687-5345951 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:5350496-5350760 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:5435837-5435573 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 123-361
Cow position: chr16:5488883-5488619 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:5525089-5525351 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 49

Conread position: 123-361
Cow position: chr16:6389637-6389908 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:7385777-7385513 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:7467620-7467356 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 123-361
Cow position: chr16:7712628-7712364 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:7718219-7717953 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:8813093-8813357 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:8883945-8883681 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:10441250-10440987 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 234

Conread position: 123-361
Cow position: chr16:11632832-11633096 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:12160281-12160535 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:12485288-12485552 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:12534956-12535206 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 215

Conread position: 123-361
Cow position: chr16:12651932-12651668 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:13721576-13721841 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:14029144-14029413 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 123-361
Cow position: chr16:14040437-14040173 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:14100851-14100596 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:14568784-14569046 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 27

Conread position: 123-361
Cow position: chr16:14662111-14662375 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 123-361
Cow position: chr16:15312293-15312029 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:15813094-15812830 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:15904209-15904472 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:15979366-15979630 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:16149736-16150000 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:16567109-16566845 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:16942728-16942464 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:18212183-18212447 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:19062846-19062583 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:19082058-19081794 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:19777925-19778189 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 122

Conread position: 123-361
Cow position: chr16:20234618-20234879 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:20278852-20278588 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:20503043-20502783 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 184

Conread position: 123-361
Cow position: chr16:20967873-20968139 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:23027727-23027466 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 168

Conread position: 123-361
Cow position: chr16:23472233-23471972 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 62

Conread position: 123-361
Cow position: chr16:23532989-23533252 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 123-361
Cow position: chr16:23877486-23877222 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:24147652-24147400 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 123-361
Cow position: chr16:24240389-24240652 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 49, 33

Conread position: 123-361
Cow position: chr16:24407924-24407660 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:24615063-24615327 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:24752915-24753179 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:24987491-24987756 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:25075605-25075341 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:25344987-25344727 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 138

Conread position: 123-361
Cow position: chr16:25444888-25444624 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 123-361
Cow position: chr16:26658976-26658713 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:26666722-26666452 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 123-361
Cow position: chr16:27592812-27593076 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:28193289-28193553 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:28468111-28468375 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:29107132-29107396 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:31426064-31425807 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 35

Conread position: 123-361
Cow position: chr16:31585491-31585754 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 196

Conread position: 123-361
Cow position: chr16:34021840-34022105 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:34809381-34809117 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:39616227-39615970 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 221

Conread position: 123-361
Cow position: chr16:39787992-39788256 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:42745472-42745736 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:44450955-44450691 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:44676366-44676102 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 123-361
Cow position: chr16:45464908-45465173 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:45534465-45534210 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 165

Conread position: 123-361
Cow position: chr16:45683703-45683435 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 62

Conread position: 123-361
Cow position: chr16:46552286-46552042 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 35

Conread position: 123-361
Cow position: chr16:47518321-47518057 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 189

Conread position: 123-361
Cow position: chr16:47773267-47773012 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 35

Conread position: 123-361
Cow position: chr16:49096976-49096712 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:49779938-49780202 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr16:50190110-50190370 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 203

Conread position: 123-361
Cow position: chr16:51042500-51042759 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 199

Conread position: 123-361
Cow position: chr16:52527240-52526979 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 174

Conread position: 123-361
Cow position: chr16:54231341-54231600 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr16:56149790-56149531 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 54

Conread position: 123-362
Cow position: chr16:5666110-5665848 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 123-363
Cow position: chr16:21461829-21461574 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 216

Conread position: 123-363
Cow position: chr16:55151335-55151076 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 179

Conread position: 123-364
Cow position: chr16:56281787-56282053 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-365
Cow position: chr16:3332902-3332638 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 204

Conread position: 123-365
Cow position: chr16:20475715-20475448 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 251

Conread position: 123-365
Cow position: chr16:35342489-35342757 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 123-365
Cow position: chr16:54297963-54297707 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 123-369
Cow position: chr16:22810562-22810835 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 164

Conread position: 123-372
Cow position: chr16:18745025-18745294 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 125

Conread position: 123-376
Cow position: chr16:24974448-24974720 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 192

Conread position: 123-393
Cow position: chr16:26389494-26389210 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 169

Conread position: 124-325
Cow position: chr16:31122774-31122995 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 50

Conread position: 124-333
Cow position: chr16:5352124-5352356 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 124-351
Cow position: chr16:5416262-5416514 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 124-358
Cow position: chr16:26671125-26671380 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 124-358
Cow position: chr16:49169878-49170130 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 232

Conread position: 124-359
Cow position: chr16:51087793-51087533 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 124-361
Cow position: chr16:41550-41282 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 124-361
Cow position: chr16:3012126-3011862 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 124-361
Cow position: chr16:15188067-15187812 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 49

Conread position: 124-361
Cow position: chr16:19409344-19409607 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 124-361
Cow position: chr16:25174246-25173987 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 124-361
Cow position: chr16:28206100-28206363 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 124-361
Cow position: chr16:41576231-41575991 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 108

Conread position: 124-361
Cow position: chr16:46101608-46101871 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 124-361
Cow position: chr16:56913230-56913490 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 126-325
Cow position: chr16:11100317-11100537 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 200

Conread position: 126-325
Cow position: chr16:20734270-20734491 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 126-331
Cow position: chr16:674974-674747 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 126-349
Cow position: chr16:16177297-16177048 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 35

Conread position: 126-361
Cow position: chr16:4461319-4461580 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 126-361
Cow position: chr16:6379630-6379891 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 126-361
Cow position: chr16:10202925-10203182 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 126-361
Cow position: chr16:16596745-16596483 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 126-361
Cow position: chr16:18678675-18678425 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 126-361
Cow position: chr16:24209389-24209650 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 126-361
Cow position: chr16:25454469-25454713 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 157

Conread position: 126-361
Cow position: chr16:42211505-42211244 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 126-361
Cow position: chr16:46385539-46385800 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 193

Conread position: 126-365
Cow position: chr16:50712430-50712695 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 127-350
Cow position: chr16:43090088-43090329 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 222

Conread position: 127-358
Cow position: chr16:46555430-46555173 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 127-361
Cow position: chr16:3597026-3597280 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 127-361
Cow position: chr16:32118585-32118327 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 158

Conread position: 127-361
Cow position: chr16:41034309-41034048 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 127-361
Cow position: chr16:48341200-48341461 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 166

Conread position: 127-363
Cow position: chr16:15408398-15408646 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 116

Conread position: 127-372
Cow position: chr16:7456980-7457240 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 35

Conread position: 128-319
Cow position: chr16:16280945-16281156 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 128-361
Cow position: chr16:42079362-42079608 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 128-365
Cow position: chr16:37477854-37478117 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 129-361
Cow position: chr16:23248956-23249207 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 130-309
Cow position: chr16:49230304-49230503 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 132-361
Cow position: chr16:44050889-44051145 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 152-361
Cow position: chr16:23810495-23810265 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 107

Conread position: 156-361
Cow position: chr16:23563412-23563196 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 26

Conread position: 167-316
Cow position: chr16:54726034-54726189 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 191-361
Cow position: chr16:40879517-40879340 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 192-361
Cow position: chr16:15570689-15570518 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 166

Conread position: 195-363
Cow position: chr16:55579559-55579394 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 77

Conread position: 198-314
Cow position: chr16:13989206-13989092 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 198-355
Cow position: chr16:4748009-4748177 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 198-361
Cow position: chr16:417816-417643 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 198-361
Cow position: chr16:21018481-21018307 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 50

Conread position: 198-361
Cow position: chr16:48956011-48955848 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 102

Conread position: 199-359
Cow position: chr16:41036122-41036278 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 35

Conread position: 199-361
Cow position: chr16:4080460-4080293 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 74

Conread position: 199-361
Cow position: chr16:49126794-49126960 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 144

Conread position: 199-361
Cow position: chr16:51043018-51042853 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 200-347
Cow position: chr16:12248551-12248402 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 201-361
Cow position: chr16:5895342-5895181 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 50

Conread position: 201-363
Cow position: chr16:1223748-1223916 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 34

Conread position: 201-363
Cow position: chr16:45158056-45158227 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 201-365
Cow position: chr16:53621928-53622100 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 202-326
Cow position: chr16:37454421-37454541 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 202-348
Cow position: chr16:19639847-19639695 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 202-361
Cow position: chr16:4079051-4079214 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 6, 70

Conread position: 202-361
Cow position: chr16:29538900-29539063 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 202-361
Cow position: chr16:48010499-48010651 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 51

Conread position: 202-365
Cow position: chr16:600333-600164 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 202-374
Cow position: chr16:2232813-2232990 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 167

Conread position: 203-361
Cow position: chr16:27730468-27730633 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 203-363
Cow position: chr16:25893416-25893254 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 35

Conread position: 203-389
Cow position: chr16:18948988-18948802 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 77

Conread position: 213-361
Cow position: chr16:37445802-37445956 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 215-361
Cow position: chr16:29679796-29679940 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 125

Conread position: 216-320
Cow position: chr16:38130125-38130020 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 216-328
Cow position: chr16:44256222-44256334 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 216-349
Cow position: chr16:34483046-34482909 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 38

Conread position: 216-358
Cow position: chr16:14758085-14757937 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 125
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 102, 55

Conread position: 216-358
Cow position: chr16:51500297-51500156 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 138, 107

Conread position: 216-359
Cow position: chr16:44034-43885 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 216-359
Cow position: chr16:24636618-24636765 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 102, 83

Conread position: 216-360
Cow position: chr16:23872277-23872417 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 216-360
Cow position: chr16:53225436-53225594 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 216-361
Cow position: chr16:1957827-1957979 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr16:2305259-2305111 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 27

Conread position: 216-361
Cow position: chr16:2407993-2408145 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 216-361
Cow position: chr16:3632963-3632814 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 85

Conread position: 216-361
Cow position: chr16:4426989-4426838 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 216-361
Cow position: chr16:5963410-5963560 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 14

Conread position: 216-361
Cow position: chr16:7504332-7504182 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr16:7541379-7541230 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 27

Conread position: 216-361
Cow position: chr16:7673478-7673630 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 216-361
Cow position: chr16:14351784-14351936 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 216-361
Cow position: chr16:16096094-16095946 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr16:22798805-22798956 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 216-361
Cow position: chr16:23403712-23403561 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr16:24229135-24228989 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 26

Conread position: 216-361
Cow position: chr16:25169124-25168975 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 101, 55

Conread position: 216-361
Cow position: chr16:25935642-25935491 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr16:26990042-26990192 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 77

Conread position: 216-361
Cow position: chr16:29050543-29050393 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 83

Conread position: 216-361
Cow position: chr16:37670610-37670760 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 216-361
Cow position: chr16:41834764-41834614 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 124
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 216-361
Cow position: chr16:44972849-44972999 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 216-361
Cow position: chr16:48649101-48648950 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 216-362
Cow position: chr16:658896-658750 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 102, 26

Conread position: 216-363
Cow position: chr16:11007612-11007457 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 216-363
Cow position: chr16:18616853-18617006 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 216-363
Cow position: chr16:28267819-28267970 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 37

Conread position: 216-363
Cow position: chr16:30052835-30052691 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 216-363
Cow position: chr16:32838173-32838324 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 19

Conread position: 216-363
Cow position: chr16:45551241-45551094 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 53

Conread position: 216-365
Cow position: chr16:2395280-2395125 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 216-365
Cow position: chr16:22320390-22320545 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 216-365
Cow position: chr16:43562497-43562652 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 216-366
Cow position: chr16:53509625-53509788 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 216-368
Cow position: chr16:25157508-25157665 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 216-368
Cow position: chr16:28022171-28022325 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 138

Conread position: 216-391
Cow position: chr16:49742630-49742809 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 157

Conread position: 217-361
Cow position: chr16:8367834-8367984 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 217-363
Cow position: chr16:7010214-7010073 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 218-365
Cow position: chr16:9786208-9786059 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 102, 74

Conread position: 219-339
Cow position: chr16:20434473-20434349 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 219-363
Cow position: chr16:5656095-5655953 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 219-363
Cow position: chr16:27013293-27013143 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 219-363
Cow position: chr16:54228391-54228540 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 219-363
Cow position: chr16:55674207-55674059 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 41

Conread position: 219-365
Cow position: chr16:41858558-41858405 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 52

Conread position: 220-363
Cow position: chr16:34833294-34833436 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 222-361
Cow position: chr16:7303650-7303504 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 226-361
Cow position: chr16:48411524-48411383 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 230-363
Cow position: chr16:28112643-28112776 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 230-365
Cow position: chr16:9417742-9417608 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 10

Conread position: 234-363
Cow position: chr16:44689284-44689414 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Show alignments to all cow chromosomes.