Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010020H11.5 |
| Conread position: | 95-363 |
| Cow position: | chr25:10633177-10633460 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 96-404 |
| Cow position: | chr25:11662276-11662606 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 108-325 |
| Cow position: | chr25:6607188-6607424 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 110-359 |
| Cow position: | chr25:16801933-16801662 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 11, 216 |
| Conread position: | 111-361 |
| Cow position: | chr25:41097702-41097978 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 112-361 |
| Cow position: | chr25:4522326-4522591 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 120-359 |
| Cow position: | chr25:12081870-12082129 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 52, 195 |
| Conread position: | 120-361 |
| Cow position: | chr25:17808292-17808559 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 120-361 |
| Cow position: | chr25:26780599-26780866 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 122-361 |
| Cow position: | chr25:34013274-34013534 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 146 |
| Conread position: | 122-365 |
| Cow position: | chr25:14954567-14954821 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 123-308 |
| Cow position: | chr25:10158225-10158020 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-315 |
| Cow position: | chr25:11584992-11584782 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 123-316 |
| Cow position: | chr25:26755951-26755738 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-319 |
| Cow position: | chr25:14568912-14568708 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-325 |
| Cow position: | chr25:17562548-17562319 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-336 |
| Cow position: | chr25:23601460-23601693 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 177 |
| Conread position: | 123-358 |
| Cow position: | chr25:14555151-14554890 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-359 |
| Cow position: | chr25:23325543-23325806 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-359 |
| Cow position: | chr25:26682045-26681799 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 123-360 |
| Cow position: | chr25:41356319-41356576 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:3688619-3688355 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:4858014-4858279 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:8935280-8935016 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:9055143-9054882 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:9413826-9413567 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 123-361 |
| Cow position: | chr25:11896011-11896274 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:13429643-13429892 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:13787448-13787194 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 45, 215 |
| Conread position: | 123-361 |
| Cow position: | chr25:13955906-13956170 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:13960543-13960282 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:15429196-15429460 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:17210651-17210914 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:17994039-17994303 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:18189895-18190158 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 50, 196 |
| Conread position: | 123-361 |
| Cow position: | chr25:18323875-18324137 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 123-361 |
| Cow position: | chr25:18886000-18886264 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:19139088-19139352 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:19336843-19337107 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:19924003-19923741 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:21120797-21120529 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:24654691-24654954 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:24669884-24670144 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:25480155-25480390 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 123-361 |
| Cow position: | chr25:25510373-25510109 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:27076541-27076281 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 167 |
| Conread position: | 123-361 |
| Cow position: | chr25:27145906-27145645 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:27231831-27231575 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 168 |
| Conread position: | 123-361 |
| Cow position: | chr25:28863353-28863092 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 168 |
| Conread position: | 123-361 |
| Cow position: | chr25:29525384-29525647 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:32609936-32610200 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:34121610-34121876 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:35554152-35553888 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:35567406-35567666 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:35589553-35589297 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:35754763-35755025 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:36127424-36127687 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 168 |
| Conread position: | 123-361 |
| Cow position: | chr25:36351222-36350958 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 123-361 |
| Cow position: | chr25:39386351-39386609 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 123-363 |
| Cow position: | chr25:37469273-37469031 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 123-364 |
| Cow position: | chr25:29802261-29802528 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 123-365 |
| Cow position: | chr25:11666146-11665879 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 50, 168 |
| Conread position: | 123-365 |
| Cow position: | chr25:17992663-17992931 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 200 |
| Conread position: | 123-365 |
| Cow position: | chr25:18072692-18072441 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 215 |
| Conread position: | 123-365 |
| Cow position: | chr25:23394346-23394081 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 191 |
| Conread position: | 123-366 |
| Cow position: | chr25:35625755-35626002 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 49, 151 |
| Conread position: | 123-391 |
| Cow position: | chr25:18330292-18330582 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 267 |
| Conread position: | 123-396 |
| Cow position: | chr25:17994814-17995114 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 47, 193 |
| Conread position: | 124-361 |
| Cow position: | chr25:9595797-9595536 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 5, 168 |
| Conread position: | 124-361 |
| Cow position: | chr25:16922312-16922571 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 167 |
| Conread position: | 124-361 |
| Cow position: | chr25:17658097-17657839 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 227 |
| Conread position: | 124-361 |
| Cow position: | chr25:25826934-25826670 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 124-361 |
| Cow position: | chr25:34164078-34164342 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 124-361 |
| Cow position: | chr25:41366679-41366928 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 124-365 |
| Cow position: | chr25:8655773-8655507 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 149 |
| Conread position: | 126-328 |
| Cow position: | chr25:15024646-15024433 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 205 |
| Conread position: | 126-361 |
| Cow position: | chr25:2047080-2047340 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 126-361 |
| Cow position: | chr25:7800494-7800237 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 126-361 |
| Cow position: | chr25:11044096-11043835 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 126-361 |
| Cow position: | chr25:41121485-41121224 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 127-359 |
| Cow position: | chr25:33838852-33838598 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 127-363 |
| Cow position: | chr25:16430553-16430800 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 128-336 |
| Cow position: | chr25:23356979-23356754 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 128-396 |
| Cow position: | chr25:14755936-14756235 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 138-361 |
| Cow position: | chr25:41135289-41135528 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 149-363 |
| Cow position: | chr25:20495988-20495762 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 165 |
| Conread position: | 167-361 |
| Cow position: | chr25:33978980-33979189 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 192-361 |
| Cow position: | chr25:17905036-17904860 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 194-361 |
| Cow position: | chr25:15453410-15453236 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 195-361 |
| Cow position: | chr25:34508789-34508962 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 196-358 |
| Cow position: | chr25:449186-449348 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 197-361 |
| Cow position: | chr25:22151496-22151325 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 199-361 |
| Cow position: | chr25:34343522-34343688 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 199-363 |
| Cow position: | chr25:22760280-22760111 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 199-363 |
| Cow position: | chr25:29312934-29313104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 200-319 |
| Cow position: | chr25:18237200-18237082 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 202-360 |
| Cow position: | chr25:40389352-40389515 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 202-361 |
| Cow position: | chr25:9395796-9395628 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 202-363 |
| Cow position: | chr25:32607134-32607294 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 113, 92 |
| Conread position: | 203-361 |
| Cow position: | chr25:37446986-37446827 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 213-360 |
| Cow position: | chr25:20006532-20006371 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 213-361 |
| Cow position: | chr25:13961928-13961773 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 214-370 |
| Cow position: | chr25:7296010-7296171 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 103, 157 |
| Conread position: | 216-321 |
| Cow position: | chr25:19367328-19367434 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 216-321 |
| Cow position: | chr25:22111665-22111560 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-321 |
| Cow position: | chr25:25755088-25755193 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-360 |
| Cow position: | chr25:40163823-40163963 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 216-361 |
| Cow position: | chr25:4372343-4372500 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 216-361 |
| Cow position: | chr25:6955438-6955287 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 216-361 |
| Cow position: | chr25:9647323-9647178 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 216-361 |
| Cow position: | chr25:12318453-12318604 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 216-361 |
| Cow position: | chr25:16401520-16401671 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 216-361 |
| Cow position: | chr25:21966760-21966609 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 216-361 |
| Cow position: | chr25:26705511-26705662 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 216-361 |
| Cow position: | chr25:28275300-28275448 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 100, 55 |
| Conread position: | 216-361 |
| Cow position: | chr25:34768051-34767899 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 216-363 |
| Cow position: | chr25:18129572-18129418 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 216-363 |
| Cow position: | chr25:21903808-21903656 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 216-363 |
| Cow position: | chr25:35612967-35613118 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 216-363 |
| Cow position: | chr25:41345994-41346131 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 216-364 |
| Cow position: | chr25:2595137-2594984 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 101, 90 |
| Conread position: | 216-365 |
| Cow position: | chr25:18486829-18486675 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 216-365 |
| Cow position: | chr25:26282395-26282240 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 216-379 |
| Cow position: | chr25:13796563-13796736 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 216-403 |
| Cow position: | chr25:36512645-36512454 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 155 |
| Conread position: | 217-365 |
| Cow position: | chr25:11956195-11956046 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 218-337 |
| Cow position: | chr25:11540491-11540371 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 218-343 |
| Cow position: | chr25:12753561-12753689 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 218-363 |
| Cow position: | chr25:20075841-20075695 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 219-361 |
| Cow position: | chr25:12938839-12938987 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 219-362 |
| Cow position: | chr25:24227980-24228120 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 219-363 |
| Cow position: | chr25:18265558-18265405 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 221-361 |
| Cow position: | chr25:26353419-26353566 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 230-361 |
| Cow position: | chr25:20613889-20613755 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 230-362 |
| Cow position: | chr25:24204780-24204914 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 121 |
| Conread position: | 232-361 |
| Cow position: | chr25:24776707-24776576 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 232-361 |
| Cow position: | chr25:40321934-40322070 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 234-362 |
| Cow position: | chr25:22576474-22576603 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 104 |
| Conread position: | 244-361 |
| Cow position: | chr25:9957439-9957555 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.