Cow genome map

Conread name: Ss1.1-Lng1-LNG010020H11.5

Conread position: 73-361
Cow position: chr29:32516090-32515776 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 190
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 104-361
Cow position: chr29:5550500-5550218 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 68, 19

Conread position: 107-361
Cow position: chr29:4519469-4519181 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 21

Conread position: 107-366
Cow position: chr29:16097812-16098096 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 46

Conread position: 110-359
Cow position: chr29:29056673-29056408 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 110-365
Cow position: chr29:15944065-15943792 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 252

Conread position: 116-364
Cow position: chr29:45208218-45207946 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 173

Conread position: 120-361
Cow position: chr29:7427426-7427694 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 120-361
Cow position: chr29:9079089-9079349 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 223

Conread position: 120-361
Cow position: chr29:15965839-15966106 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 120-361
Cow position: chr29:16347926-16347659 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 122-325
Cow position: chr29:406782-406995 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 139

Conread position: 123-316
Cow position: chr29:21199544-21199757 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-316
Cow position: chr29:38672381-38672595 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 49

Conread position: 123-317
Cow position: chr29:19523217-19523003 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-319
Cow position: chr29:19857169-19856953 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 123-326
Cow position: chr29:40117034-40116811 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 123-328
Cow position: chr29:17300622-17300401 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 63

Conread position: 123-357
Cow position: chr29:10652821-10652564 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 123-357
Cow position: chr29:13058415-13058161 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 213

Conread position: 123-358
Cow position: chr29:2401066-2400805 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-358
Cow position: chr29:6413993-6413733 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-358
Cow position: chr29:21167979-21167718 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-359
Cow position: chr29:40498168-40498426 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 123-360
Cow position: chr29:16195321-16195060 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 6, 136

Conread position: 123-360
Cow position: chr29:34780273-34780536 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:527125-527389 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:528808-529069 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:606936-607200 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:1479163-1478899 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 123-361
Cow position: chr29:2103553-2103290 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 196

Conread position: 123-361
Cow position: chr29:2461868-2461604 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:2950378-2950114 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:3330294-3330040 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:4480683-4480942 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 123-361
Cow position: chr29:4611073-4610809 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:4875426-4875691 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 123-361
Cow position: chr29:5241107-5240843 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 123-361
Cow position: chr29:5786207-5785942 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:6935195-6934931 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:7848103-7847840 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 170

Conread position: 123-361
Cow position: chr29:8589025-8589294 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:10031941-10032206 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:10643703-10643967 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:10820003-10820267 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:11119000-11119264 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:12798296-12798031 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:13027915-13027665 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 168

Conread position: 123-361
Cow position: chr29:13623662-13623926 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:13923790-13923527 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 196

Conread position: 123-361
Cow position: chr29:14207856-14208120 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:15570246-15569981 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:15698745-15699009 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:17458442-17458706 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:18011283-18011023 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:19398368-19398109 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 32

Conread position: 123-361
Cow position: chr29:19524429-19524691 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 62

Conread position: 123-361
Cow position: chr29:19619557-19619821 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 123-361
Cow position: chr29:19657593-19657329 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 123-361
Cow position: chr29:19761751-19761506 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 35

Conread position: 123-361
Cow position: chr29:20254875-20254612 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 196

Conread position: 123-361
Cow position: chr29:21227687-21227423 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:21474861-21474597 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:24420904-24420649 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 162

Conread position: 123-361
Cow position: chr29:24728589-24728851 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 177

Conread position: 123-361
Cow position: chr29:24982859-24983123 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 123-361
Cow position: chr29:27823802-27823560 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 134

Conread position: 123-361
Cow position: chr29:29565627-29565893 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:30432486-30432747 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 35

Conread position: 123-361
Cow position: chr29:31093850-31094114 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:31185088-31184824 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:31765751-31765487 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:32292306-32292042 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:32298436-32298175 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:32329548-32329812 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:32353307-32353043 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 123-361
Cow position: chr29:32560305-32560569 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:32732813-32732546 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 123-361
Cow position: chr29:34794146-34794411 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:35076842-35076572 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 135

Conread position: 123-361
Cow position: chr29:38229712-38229455 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 47

Conread position: 123-361
Cow position: chr29:38271715-38271451 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:38349650-38349914 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:38409908-38409645 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 190

Conread position: 123-361
Cow position: chr29:40157456-40157192 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:40295019-40294755 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:41183470-41183733 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:42255267-42255530 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-361
Cow position: chr29:44020184-44020446 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 241

Conread position: 123-361
Cow position: chr29:45462943-45462679 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 123-361
Cow position: chr29:45627045-45626784 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 241

Conread position: 123-363
Cow position: chr29:6218106-6218365 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 181

Conread position: 123-363
Cow position: chr29:21429152-21429418 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 123-365
Cow position: chr29:87523-87772 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 33

Conread position: 123-365
Cow position: chr29:32556035-32556300 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 123-366
Cow position: chr29:18364928-18365179 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 76

Conread position: 123-366
Cow position: chr29:19514627-19514895 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 266

Conread position: 123-367
Cow position: chr29:8934768-8934502 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 49, 168

Conread position: 123-368
Cow position: chr29:13585916-13585644 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 123-368
Cow position: chr29:17408816-17408545 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 187

Conread position: 123-393
Cow position: chr29:13639871-13640158 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 20

Conread position: 123-396
Cow position: chr29:14569008-14568704 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 124-316
Cow position: chr29:2534113-2533901 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 124-358
Cow position: chr29:6879223-6879484 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 124-359
Cow position: chr29:7724373-7724115 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 124-359
Cow position: chr29:8623524-8623758 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 78

Conread position: 124-359
Cow position: chr29:27814487-27814237 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 167

Conread position: 124-361
Cow position: chr29:2521058-2520794 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 124-361
Cow position: chr29:7811486-7811748 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 124-361
Cow position: chr29:16065421-16065158 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 124-361
Cow position: chr29:36209406-36209142 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 124-361
Cow position: chr29:43692437-43692188 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 126-357
Cow position: chr29:11136411-11136655 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 126-361
Cow position: chr29:2694409-2694149 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 126-361
Cow position: chr29:7666554-7666808 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 223

Conread position: 126-361
Cow position: chr29:8667289-8667034 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 126-361
Cow position: chr29:13590234-13590495 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 126-361
Cow position: chr29:27702786-27702525 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 127-361
Cow position: chr29:727437-727177 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 127-361
Cow position: chr29:2744795-2745060 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 137

Conread position: 127-361
Cow position: chr29:28696673-28696931 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 128-361
Cow position: chr29:16185072-16185331 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 132-366
Cow position: chr29:14313446-14313706 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 138-361
Cow position: chr29:35291352-35291111 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 148-365
Cow position: chr29:2463227-2463466 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 143

Conread position: 189-361
Cow position: chr29:2837710-2837888 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 192-361
Cow position: chr29:9843374-9843198 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 192-361
Cow position: chr29:15719828-15719652 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 192-361
Cow position: chr29:34851378-34851202 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 196-314
Cow position: chr29:15289121-15289002 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 197-359
Cow position: chr29:4367056-4366895 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 75

Conread position: 198-359
Cow position: chr29:45650928-45651095 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 198-363
Cow position: chr29:18399873-18399703 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 198-363
Cow position: chr29:21614924-21614765 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 75

Conread position: 198-365
Cow position: chr29:18072318-18072143 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 78

Conread position: 199-320
Cow position: chr29:40338182-40338305 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 199-333
Cow position: chr29:27858195-27858060 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 201-316
Cow position: chr29:16035781-16035897 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 201-361
Cow position: chr29:10237043-10237209 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 137

Conread position: 201-361
Cow position: chr29:20429581-20429742 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 70

Conread position: 202-358
Cow position: chr29:3106900-3106747 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 202-387
Cow position: chr29:15755554-15755742 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 169

Conread position: 215-371
Cow position: chr29:32289988-32289831 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 91

Conread position: 216-310
Cow position: chr29:34429619-34429526 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 216-319
Cow position: chr29:13553507-13553404 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 216-326
Cow position: chr29:17135139-17135030 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 216-329
Cow position: chr29:43517365-43517479 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 216-332
Cow position: chr29:15738979-15739098 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 216-333
Cow position: chr29:6921460-6921581 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 216-357
Cow position: chr29:27630344-27630485 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 55

Conread position: 216-359
Cow position: chr29:16012376-16012516 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr29:44870-45016 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 216-361
Cow position: chr29:108977-108829 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 216-361
Cow position: chr29:1688341-1688190 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 216-361
Cow position: chr29:2402285-2402134 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 216-361
Cow position: chr29:4164287-4164136 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 216-361
Cow position: chr29:6262411-6262561 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 83

Conread position: 216-361
Cow position: chr29:14051055-14051201 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 216-361
Cow position: chr29:15693853-15694004 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 216-361
Cow position: chr29:18879305-18879461 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 216-361
Cow position: chr29:23980304-23980158 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 90

Conread position: 216-361
Cow position: chr29:25928911-25929060 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 83

Conread position: 216-361
Cow position: chr29:26161236-26161387 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr29:26289718-26289864 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 100, 89

Conread position: 216-361
Cow position: chr29:29065792-29065645 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 60

Conread position: 216-361
Cow position: chr29:31786071-31785923 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 27

Conread position: 216-361
Cow position: chr29:32942244-32942093 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 77

Conread position: 216-361
Cow position: chr29:35265516-35265365 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 216-361
Cow position: chr29:35273440-35273591 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 216-361
Cow position: chr29:40618256-40618407 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 216-361
Cow position: chr29:43327114-43326962 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 216-362
Cow position: chr29:13634965-13635118 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 216-363
Cow position: chr29:2298728-2298873 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 216-363
Cow position: chr29:11786604-11786449 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 216-363
Cow position: chr29:13129055-13129197 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 216-363
Cow position: chr29:32962906-32962751 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 216-365
Cow position: chr29:960797-960645 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 62

Conread position: 216-365
Cow position: chr29:22279971-22279816 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 216-365
Cow position: chr29:32807958-32807804 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 90

Conread position: 216-366
Cow position: chr29:40096126-40095974 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 112

Conread position: 216-367
Cow position: chr29:10154633-10154483 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 102

Conread position: 216-369
Cow position: chr29:35955725-35955872 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 102

Conread position: 216-383
Cow position: chr29:27285478-27285302 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 41

Conread position: 216-397
Cow position: chr29:1743098-1742908 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 217-324
Cow position: chr29:7604998-7604889 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 217-358
Cow position: chr29:22935645-22935498 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 217-361
Cow position: chr29:32543731-32543585 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 21

Conread position: 218-359
Cow position: chr29:32800863-32800717 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 218-361
Cow position: chr29:10297268-10297416 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 218-361
Cow position: chr29:39076122-39076270 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 219-358
Cow position: chr29:13652650-13652510 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 219-382
Cow position: chr29:11365613-11365445 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 153

Conread position: 221-358
Cow position: chr29:16614929-16615071 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 222-359
Cow position: chr29:18010348-18010217 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 222-361
Cow position: chr29:30270260-30270405 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 230-315
Cow position: chr29:2532453-2532368 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 230-361
Cow position: chr29:16042246-16042109 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 230-361
Cow position: chr29:28621885-28622018 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 230-363
Cow position: chr29:42940556-42940424 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 230-368
Cow position: chr29:5977747-5977883 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 232-364
Cow position: chr29:20999786-20999656 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 235-361
Cow position: chr29:13128977-13128845 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 238-361
Cow position: chr29:20025111-20025240 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Show alignments to all cow chromosomes.