Cow genome map


           Conread name:
           Ss1.1-Lng1-LNG010022C10.5
        

               Conread position:
               103-257
               

               Cow position:
               chr5:22839324-22839478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               110-291
               

               Cow position:
               chr5:23640869-23641049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               111-230
               

               Cow position:
               chr5:49655881-49656001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               111-236
               

               Cow position:
               chr5:34279460-34279588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               111-247
               

               Cow position:
               chr5:64399155-64399014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               111-291
               

               Cow position:
               chr5:56385360-56385169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               112-289
               

               Cow position:
               chr5:47680872-47681065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               113-232
               

               Cow position:
               chr5:41637009-41636890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-241
               

               Cow position:
               chr5:30333095-30332965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 119
               

               Conread position:
               113-247
               

               Cow position:
               chr5:17869830-17869694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               115-239
               

               Cow position:
               chr5:63188184-63188312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.