Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010024G10.5 |
| Conread position: | 817-1104 |
| Cow position: | chr14:25783430-25783719 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 817-1109 |
| Cow position: | chr14:25794843-25794550 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 817-1122 |
| Cow position: | chr14:25877498-25877804 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 817-1123 |
| Cow position: | chr14:25836131-25836441 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 275 |
| Conread position: | 818-1122 |
| Cow position: | chr14:25876488-25876796 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 274 |
| Conread position: | 818-1122 |
| Cow position: | chr14:25877078-25877384 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 70, 272 |
| Conread position: | 818-1123 |
| Cow position: | chr14:25836638-25836945 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 272 |
| Conread position: | 818-1123 |
| Cow position: | chr14:25860027-25860334 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 81, 272 |
| Conread position: | 819-1108 |
| Cow position: | chr14:25783850-25784143 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 35, 131 |
| Conread position: | 819-1124 |
| Cow position: | chr14:25783934-25784243 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 820-1080 |
| Cow position: | chr14:25836974-25837239 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 820-1105 |
| Cow position: | chr14:3127767-3127478 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 274 |
| Conread position: | 820-1107 |
| Cow position: | chr14:25795345-25795056 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 820-1107 |
| Cow position: | chr14:25859691-25859982 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 274 |
| Conread position: | 820-1119 |
| Cow position: | chr14:25860195-25860497 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 11, 272 |
| Conread position: | 820-1119 |
| Cow position: | chr14:25877246-25877548 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 272 |
| Conread position: | 820-1122 |
| Cow position: | chr14:3155412-3155718 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 269 |
| Conread position: | 820-1124 |
| Cow position: | chr14:3100914-3100610 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 820-1124 |
| Cow position: | chr14:25876994-25877302 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 821-1090 |
| Cow position: | chr14:25794422-25794149 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 133 |
| Conread position: | 821-1114 |
| Cow position: | chr14:25794590-25794292 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 822-1104 |
| Cow position: | chr14:25784359-25784643 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 822-1106 |
| Cow position: | chr14:25910922-25911208 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 822-1122 |
| Cow position: | chr14:25836054-25836356 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 268 |
| Conread position: | 822-1123 |
| Cow position: | chr14:25860115-25860418 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 193 |
| Conread position: | 822-1123 |
| Cow position: | chr14:25877166-25877469 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 193 |
| Conread position: | 822-1124 |
| Cow position: | chr14:25783603-25783907 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 822-1124 |
| Cow position: | chr14:25784275-25784579 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 74, 126 |
| Conread position: | 822-1127 |
| Cow position: | chr14:25795091-25794784 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 825-1123 |
| Cow position: | chr14:25794668-25794368 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 826-1123 |
| Cow position: | chr14:25859279-25859578 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 71, 264 |
| Conread position: | 827-1113 |
| Cow position: | chr14:25795002-25794715 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 827-1114 |
| Cow position: | chr14:3155994-3156283 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 260 |
| Conread position: | 827-1116 |
| Cow position: | chr14:25836563-25836854 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 265 |
| Conread position: | 827-1123 |
| Cow position: | chr14:25836731-25837029 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 64, 265 |
| Conread position: | 827-1124 |
| Cow position: | chr14:25783524-25783823 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 827-1127 |
| Cow position: | chr14:25784196-25784498 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 827-1127 |
| Cow position: | chr14:25794918-25794616 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 828-1104 |
| Cow position: | chr14:25784449-25784727 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 127 |
| Conread position: | 828-1112 |
| Cow position: | chr14:3156079-3156365 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 264 |
| Conread position: | 829-1109 |
| Cow position: | chr14:25860374-25860656 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 262 |
| Conread position: | 829-1109 |
| Cow position: | chr14:25877425-25877707 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 62, 263 |
| Conread position: | 829-1116 |
| Cow position: | chr14:25876753-25877042 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 261 |
| Conread position: | 829-1123 |
| Cow position: | chr14:25860458-25860754 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 261 |
| Conread position: | 829-1124 |
| Cow position: | chr14:25836397-25836694 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 832-1123 |
| Cow position: | chr14:25876336-25876629 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 258 |
| Conread position: | 832-1124 |
| Cow position: | chr14:25784117-25784411 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 841-1106 |
| Cow position: | chr14:681005-681272 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 841-1125 |
| Cow position: | chr14:3080064-3079778 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 251 |
| Conread position: | 870-1107 |
| Cow position: | chr14:3080707-3080468 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 218 |
| Conread position: | 880-1116 |
| Cow position: | chr14:25859249-25859487 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 210 |
| Conread position: | 884-1123 |
| Cow position: | chr14:25910738-25910973 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 889-1116 |
| Cow position: | chr14:25836041-25836266 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 889-1120 |
| Cow position: | chr14:447583-447812 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 5 |
| Conread position: | 891-1116 |
| Cow position: | chr14:3155404-3155628 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 892-1107 |
| Cow position: | chr14:25877658-25877873 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 896-1109 |
| Cow position: | chr14:25876655-25876867 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 896-1116 |
| Cow position: | chr14:3080594-3080375 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 896-1123 |
| Cow position: | chr14:25910831-25911057 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 896-1125 |
| Cow position: | chr14:3080090-3079862 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 898-1116 |
| Cow position: | chr14:25836889-25837106 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 898-1119 |
| Cow position: | chr14:25895872-25896091 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 898-1123 |
| Cow position: | chr14:25910917-25911141 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 898-1124 |
| Cow position: | chr14:25836973-25837198 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 898-1125 |
| Cow position: | chr14:3080172-3079946 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 187, 0 |
Show alignments to all cow chromosomes.