Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010024G10.5 |
| Conread position: | 803-1126 |
| Cow position: | chr17:22590283-22589957 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 6, 46 |
| Conread position: | 817-1123 |
| Cow position: | chr17:22498889-22498581 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 818-1127 |
| Cow position: | chr17:22551841-22551530 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 818-1127 |
| Cow position: | chr17:22552261-22551950 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 820-1126 |
| Cow position: | chr17:22499308-22498998 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 269 |
| Conread position: | 820-1127 |
| Cow position: | chr17:22451958-22451647 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 264 |
| Conread position: | 820-1128 |
| Cow position: | chr17:22589509-22589199 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 272 |
| Conread position: | 822-1107 |
| Cow position: | chr17:22589843-22589556 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 270 |
| Conread position: | 822-1108 |
| Cow position: | chr17:22552509-22552221 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 822-1124 |
| Cow position: | chr17:22473341-22473645 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 74, 270 |
| Conread position: | 822-1125 |
| Cow position: | chr17:22552089-22551784 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 270 |
| Conread position: | 822-1126 |
| Cow position: | chr17:22452206-22451900 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 822-1126 |
| Cow position: | chr17:22452374-22452068 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 270 |
| Conread position: | 822-1128 |
| Cow position: | chr17:22473593-22473901 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 55, 266 |
| Conread position: | 826-1125 |
| Cow position: | chr17:22473261-22473562 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 265 |
| Conread position: | 827-1085 |
| Cow position: | chr17:22498795-22498534 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 827-1122 |
| Cow position: | chr17:22473430-22473725 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 827-1124 |
| Cow position: | chr17:22473514-22473813 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 261 |
| Conread position: | 832-1123 |
| Cow position: | chr17:22452280-22451987 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 260 |
| Conread position: | 832-1125 |
| Cow position: | chr17:22452028-22451733 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 259 |
| Conread position: | 837-1104 |
| Cow position: | chr17:22552326-22552057 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 838-1106 |
| Cow position: | chr17:22499036-22498766 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 839-1122 |
| Cow position: | chr17:22552660-22552375 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 248 |
| Conread position: | 839-1127 |
| Cow position: | chr17:22552744-22552454 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 841-1125 |
| Cow position: | chr17:22552406-22552120 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 47, 251 |
| Conread position: | 848-1123 |
| Cow position: | chr17:22552568-22552290 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 240 |
| Conread position: | 870-1104 |
| Cow position: | chr17:22499172-22498936 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 870-1126 |
| Cow position: | chr17:22452410-22452152 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 222 |
| Conread position: | 871-1104 |
| Cow position: | chr17:22473726-22473962 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 222 |
| Conread position: | 872-1126 |
| Cow position: | chr17:22590297-22590041 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 215 |
| Conread position: | 897-1108 |
| Cow position: | chr17:22499394-22499184 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 192, 0 |
Show alignments to all cow chromosomes.