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Cow genome map

           
Conread name:
           
Ss1.1-Lng1-LNG010024G10.5
        

               
Conread position:
               
795-1112
               

               
Cow position:
               
chr18:43093524-43093202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 300
               

               
Conread position:
               
795-1124
               

               
Cow position:
               
chr18:43175294-43174960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
25, 300
               

               
Conread position:
               
796-1127
               

               
Cow position:
               
chr18:43093187-43092851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 299
               

               
Conread position:
               
800-1128
               

               
Cow position:
               
chr18:42792291-42792624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
803-1116
               

               
Cow position:
               
chr18:49033394-49033078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
803-1117
               

               
Cow position:
               
chr18:51368446-51368129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
803-1117
               

               
Cow position:
               
chr18:56248169-56247855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
812-1126
               

               
Cow position:
               
chr18:42985141-42984826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
813-1126
               

               
Cow position:
               
chr18:40324885-40324570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 275
               

               
Conread position:
               
814-1116
               

               
Cow position:
               
chr18:51367679-51367375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
814-1124
               

               
Cow position:
               
chr18:40324295-40323984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
814-1128
               

               
Cow position:
               
chr18:51752248-51751935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
815-1104
               

               
Cow position:
               
chr18:40324547-40324256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
815-1110
               

               
Cow position:
               
chr18:14454018-14453722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
815-1116
               

               
Cow position:
               
chr18:51368349-51368046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
816-1127
               

               
Cow position:
               
chr18:43093668-43093355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
817-1107
               

               
Cow position:
               
chr18:42985304-42985013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
817-1107
               

               
Cow position:
               
chr18:43174849-43174557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 271
               

               
Conread position:
               
817-1116
               

               
Cow position:
               
chr18:44184295-44183994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
817-1122
               

               
Cow position:
               
chr18:40075278-40075585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr18:41949260-41948952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
817-1124
               

               
Cow position:
               
chr18:43119984-43119675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 271
               

               
Conread position:
               
817-1126
               

               
Cow position:
               
chr18:42744716-42744403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
817-1126
               

               
Cow position:
               
chr18:53586996-53586685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
817-1127
               

               
Cow position:
               
chr18:42744462-42744150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 275
               

               
Conread position:
               
817-1128
               

               
Cow position:
               
chr18:33064010-33063698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
818-1063
               

               
Cow position:
               
chr18:44240601-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
818-1103
               

               
Cow position:
               
chr18:44253635-44253349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 262
               

               
Conread position:
               
818-1104
               

               
Cow position:
               
chr18:41197663-41197951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
818-1104
               

               
Cow position:
               
chr18:41198251-41198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
818-1104
               

               
Cow position:
               
chr18:43022899-43022611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
818-1104
               

               
Cow position:
               
chr18:51766078-51765790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 274
               

               
Conread position:
               
818-1106
               

               
Cow position:
               
chr18:42791220-42791510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 269
               

               
Conread position:
               
818-1106
               

               
Cow position:
               
chr18:50848507-50848797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 272
               

               
Conread position:
               
818-1107
               

               
Cow position:
               
chr18:1418258-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
818-1107
               

               
Cow position:
               
chr18:44398267-44397976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 274
               

               
Conread position:
               
818-1107
               

               
Cow position:
               
chr18:51765324-51765031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
818-1108
               

               
Cow position:
               
chr18:33065018-33064726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 270
               

               
Conread position:
               
818-1109
               

               
Cow position:
               
chr18:51789049-51788756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 274
               

               
Conread position:
               
818-1110
               

               
Cow position:
               
chr18:42837764-42837470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
818-1111
               

               
Cow position:
               
chr18:44397847-44397552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
818-1112
               

               
Cow position:
               
chr18:42791976-42792272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
818-1112
               

               
Cow position:
               
chr18:51812292-51811996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 274
               

               
Conread position:
               
818-1116
               

               
Cow position:
               
chr18:43175016-43174716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
818-1124
               

               
Cow position:
               
chr18:43175100-43174792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
818-1126
               

               
Cow position:
               
chr18:42837596-42837286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 274
               

               
Conread position:
               
818-1126
               

               
Cow position:
               
chr18:42837848-42837538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 274
               

               
Conread position:
               
818-1126
               

               
Cow position:
               
chr18:44154279-44153970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
818-1127
               

               
Cow position:
               
chr18:14453200-14452889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
819-1110
               

               
Cow position:
               
chr18:44154026-44153740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
819-1127
               

               
Cow position:
               
chr18:50295361-50295671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 135
               

               
Conread position:
               
820-1037
               

               
Cow position:
               
chr18:42959630-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
820-1072
               

               
Cow position:
               
chr18:41198503-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
820-1098
               

               
Cow position:
               
chr18:42675065-42674783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:33064346-33064058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:43120151-43119863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 195
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:51765236-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
76, 271
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:51765826-51765538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 274
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52427975-52428261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52428227-52428513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52428311-52428597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52428393-52428681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52433154-52433442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52433408-52433694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52433492-52433778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1104
               

               
Cow position:
               
chr18:52433574-52433862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1105
               

               
Cow position:
               
chr18:33064094-33063805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 270
               

               
Conread position:
               
820-1107
               

               
Cow position:
               
chr18:50083874-50084165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
820-1108
               

               
Cow position:
               
chr18:33064680-33064390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 268
               

               
Conread position:
               
820-1108
               

               
Cow position:
               
chr18:42675233-42674941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1108
               

               
Cow position:
               
chr18:44397929-44397639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
820-1108
               

               
Cow position:
               
chr18:50059617-50059327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 260
               

               
Conread position:
               
820-1108
               

               
Cow position:
               
chr18:51789553-51789261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1109
               

               
Cow position:
               
chr18:44184882-44184589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 272
               

               
Conread position:
               
820-1110
               

               
Cow position:
               
chr18:42984798-42984506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
820-1112
               

               
Cow position:
               
chr18:43167880-43168176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
820-1114
               

               
Cow position:
               
chr18:52428647-52428943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1114
               

               
Cow position:
               
chr18:52433828-52434124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1116
               

               
Cow position:
               
chr18:51400620-51400920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1116
               

               
Cow position:
               
chr18:51400788-51401088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 274
               

               
Conread position:
               
820-1116
               

               
Cow position:
               
chr18:56329427-56329127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
820-1123
               

               
Cow position:
               
chr18:51789301-51788995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 274
               

               
Conread position:
               
820-1123
               

               
Cow position:
               
chr18:52428563-52428868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1123
               

               
Cow position:
               
chr18:52433744-52434049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1123
               

               
Cow position:
               
chr18:52447280-52447587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:33064766-33064458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 274
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:42744209-42743901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52427805-52428113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52428059-52428365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52428141-52428449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52428479-52428785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52433240-52433546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52433322-52433630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1124
               

               
Cow position:
               
chr18:52433660-52433966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
820-1125
               

               
Cow position:
               
chr18:41948670-41948363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
820-1125
               

               
Cow position:
               
chr18:51812712-51812403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
820-1126
               

               
Cow position:
               
chr18:41948922-41948614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 268
               

               
Conread position:
               
820-1126
               

               
Cow position:
               
chr18:43022731-43022421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
820-1126
               

               
Cow position:
               
chr18:43168132-43168442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
820-1128
               

               
Cow position:
               
chr18:40324628-40324319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
821-1107
               

               
Cow position:
               
chr18:40324207-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
822-1067
               

               
Cow position:
               
chr18:44397759-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
822-1069
               

               
Cow position:
               
chr18:42674641-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
822-1098
               

               
Cow position:
               
chr18:44240353-44240631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
822-1104
               

               
Cow position:
               
chr18:42984964-42984681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
822-1104
               

               
Cow position:
               
chr18:43048636-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
69, 266
               

               
Conread position:
               
822-1104
               

               
Cow position:
               
chr18:44239933-44240217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 265
               

               
Conread position:
               
822-1106
               

               
Cow position:
               
chr18:49032366-49032080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 266
               

               
Conread position:
               
822-1107
               

               
Cow position:
               
chr18:33064258-33063971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
69, 266
               

               
Conread position:
               
822-1107
               

               
Cow position:
               
chr18:43023063-43022776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
822-1107
               

               
Cow position:
               
chr18:43175180-43174893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
822-1108
               

               
Cow position:
               
chr18:40086506-40086218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
822-1108
               

               
Cow position:
               
chr18:42837676-42837388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 266
               

               
Conread position:
               
822-1108
               

               
Cow position:
               
chr18:43168220-43168508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
822-1109
               

               
Cow position:
               
chr18:41948836-41948547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 265
               

               
Conread position:
               
822-1111
               

               
Cow position:
               
chr18:56247807-56247514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 272
               

               
Conread position:
               
822-1112
               

               
Cow position:
               
chr18:14453280-14452988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
822-1112
               

               
Cow position:
               
chr18:42827412-42827704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
822-1112
               

               
Cow position:
               
chr18:44398095-44397803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
822-1113
               

               
Cow position:
               
chr18:41198171-41198464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 269
               

               
Conread position:
               
822-1113
               

               
Cow position:
               
chr18:41198423-41198716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
822-1115
               

               
Cow position:
               
chr18:42960039-42959746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
822-1116
               

               
Cow position:
               
chr18:44398347-44398051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
822-1122
               

               
Cow position:
               
chr18:44240101-44240403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
822-1123
               

               
Cow position:
               
chr18:43093242-43092939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
822-1123
               

               
Cow position:
               
chr18:51789213-51788910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 269
               

               
Conread position:
               
822-1123
               

               
Cow position:
               
chr18:51812456-51812153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 269
               

               
Conread position:
               
822-1124
               

               
Cow position:
               
chr18:33092930-33092626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 193
               

               
Conread position:
               
822-1124
               

               
Cow position:
               
chr18:41948752-41948448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
822-1124
               

               
Cow position:
               
chr18:42984880-42984576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
74, 266
               

               
Conread position:
               
822-1124
               

               
Cow position:
               
chr18:42985048-42984744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
822-1124
               

               
Cow position:
               
chr18:43022559-43022255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
822-1124
               

               
Cow position:
               
chr18:51874316-51874620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 270
               

               
Conread position:
               
822-1125
               

               
Cow position:
               
chr18:41198003-41198308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
75, 270
               

               
Conread position:
               
822-1125
               

               
Cow position:
               
chr18:49032702-49032397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:41197583-41197889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:42674977-42674671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:42744121-42743815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:42744289-42743983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:43022643-43022337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 266
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:43174928-43174622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
822-1126
               

               
Cow position:
               
chr18:44154446-44154137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
822-1127
               

               
Cow position:
               
chr18:43048552-43048246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
822-1127
               

               
Cow position:
               
chr18:44184626-44184319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
823-1122
               

               
Cow position:
               
chr18:51400373-51400674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 268
               

               
Conread position:
               
826-1086
               

               
Cow position:
               
chr18:51751987-51751724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
826-1104
               

               
Cow position:
               
chr18:42960287-42960007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
826-1104
               

               
Cow position:
               
chr18:44253304-44253025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 198
               

               
Conread position:
               
826-1112
               

               
Cow position:
               
chr18:51789629-51789341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
70, 212
               

               
Conread position:
               
826-1127
               

               
Cow position:
               
chr18:53509670-53509973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
827-1075
               

               
Cow position:
               
chr18:44184201-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
827-1082
               

               
Cow position:
               
chr18:52428738-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
827-1087
               

               
Cow position:
               
chr18:51969438-51969699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
827-1104
               

               
Cow position:
               
chr18:33064589-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
827-1104
               

               
Cow position:
               
chr18:50848768-50849047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
827-1104
               

               
Cow position:
               
chr18:51789460-51789181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
827-1106
               

               
Cow position:
               
chr18:51368085-51367805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
827-1106
               

               
Cow position:
               
chr18:56247548-56247275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
827-1107
               

               
Cow position:
               
chr18:33064505-33064223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 186
               

               
Conread position:
               
827-1107
               

               
Cow position:
               
chr18:42985547-42985265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 206
               

               
Conread position:
               
827-1107
               

               
Cow position:
               
chr18:43022470-43022188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
827-1107
               

               
Cow position:
               
chr18:44240022-44240304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
827-1107
               

               
Cow position:
               
chr18:44240442-44240724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 261
               

               
Conread position:
               
827-1107
               

               
Cow position:
               
chr18:44398006-44397724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
827-1108
               

               
Cow position:
               
chr18:43119806-43119523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 261
               

               
Conread position:
               
827-1108
               

               
Cow position:
               
chr18:44184453-44184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
827-1108
               

               
Cow position:
               
chr18:44184789-44184506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
827-1108
               

               
Cow position:
               
chr18:51812787-51812504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 265
               

               
Conread position:
               
827-1108
               

               
Cow position:
               
chr18:51969522-51969803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 262
               

               
Conread position:
               
827-1110
               

               
Cow position:
               
chr18:44239854-44240139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
827-1110
               

               
Cow position:
               
chr18:51969688-51969964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
827-1112
               

               
Cow position:
               
chr18:42791145-42791432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
827-1116
               

               
Cow position:
               
chr18:40306182-40306473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
827-1116
               

               
Cow position:
               
chr18:43119890-43119599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
827-1122
               

               
Cow position:
               
chr18:51812535-51812238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 265
               

               
Conread position:
               
827-1123
               

               
Cow position:
               
chr18:44253710-44253412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 265
               

               
Conread position:
               
827-1123
               

               
Cow position:
               
chr18:51812367-51812069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 261
               

               
Conread position:
               
827-1123
               

               
Cow position:
               
chr18:51839296-51838998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:41949167-41948868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 265
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:42837503-42837204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:43093321-43093022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:44240274-44240573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:44240526-44240825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 261
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:52447625-52447924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:52447709-52448008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:52447793-52448092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
827-1124
               

               
Cow position:
               
chr18:52447961-52448260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 265
               

               
Conread position:
               
827-1125
               

               
Cow position:
               
chr18:42837419-42837119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 265
               

               
Conread position:
               
827-1125
               

               
Cow position:
               
chr18:44184705-44184405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
827-1125
               

               
Cow position:
               
chr18:49022827-49023127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 264
               

               
Conread position:
               
827-1126
               

               
Cow position:
               
chr18:40074952-40075253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
827-1126
               

               
Cow position:
               
chr18:42744620-42744319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
827-1126
               

               
Cow position:
               
chr18:52447877-52448178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
827-1126
               

               
Cow position:
               
chr18:56494109-56494410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 265
               

               
Conread position:
               
827-1127
               

               
Cow position:
               
chr18:42792069-42792371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
827-1127
               

               
Cow position:
               
chr18:43048715-43048413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
70, 261
               

               
Conread position:
               
827-1127
               

               
Cow position:
               
chr18:52447457-52447759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
827-1127
               

               
Cow position:
               
chr18:52448045-52448348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
827-1127
               

               
Cow position:
               
chr18:53586902-53586600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
827-1128
               

               
Cow position:
               
chr18:1418015-1418318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 265
               

               
Conread position:
               
827-1128
               

               
Cow position:
               
chr18:42791901-42792204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 260
               

               
Conread position:
               
827-1128
               

               
Cow position:
               
chr18:44184537-44184234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
828-1088
               

               
Cow position:
               
chr18:44153934-44153677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
828-1098
               

               
Cow position:
               
chr18:54980162-54980434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
828-1101
               

               
Cow position:
               
chr18:44253793-44253518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
828-1104
               

               
Cow position:
               
chr18:54967802-54968078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
828-1110
               

               
Cow position:
               
chr18:51765984-51765700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 264
               

               
Conread position:
               
828-1110
               

               
Cow position:
               
chr18:51839127-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
828-1116
               

               
Cow position:
               
chr18:51788955-51788666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
828-1123
               

               
Cow position:
               
chr18:51789795-51789498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
828-1123
               

               
Cow position:
               
chr18:51812954-51812657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
828-1124
               

               
Cow position:
               
chr18:1417932-1418230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
828-1124
               

               
Cow position:
               
chr18:42674887-42674589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
828-1126
               

               
Cow position:
               
chr18:41197505-41197805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 264
               

               
Conread position:
               
828-1127
               

               
Cow position:
               
chr18:51812198-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 264
               

               
Conread position:
               
829-1088
               

               
Cow position:
               
chr18:51400883-51401145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
829-1106
               

               
Cow position:
               
chr18:33064839-33064560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 263
               

               
Conread position:
               
829-1110
               

               
Cow position:
               
chr18:51400715-51400998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
829-1110
               

               
Cow position:
               
chr18:51839378-51839095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
829-1111
               

               
Cow position:
               
chr18:44398424-44398140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 258
               

               
Conread position:
               
829-1116
               

               
Cow position:
               
chr18:51752068-51751779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 263
               

               
Conread position:
               
829-1117
               

               
Cow position:
               
chr18:43175593-43175303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
829-1123
               

               
Cow position:
               
chr18:51367580-51367284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 263
               

               
Conread position:
               
829-1123
               

               
Cow position:
               
chr18:51789374-51789078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
829-1123
               

               
Cow position:
               
chr18:51812617-51812321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
829-1124
               

               
Cow position:
               
chr18:40324701-40324404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
829-1124
               

               
Cow position:
               
chr18:52447375-52447672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
830-1127
               

               
Cow position:
               
chr18:44253875-44253576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
831-1111
               

               
Cow position:
               
chr18:41948995-41948713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
832-1071
               

               
Cow position:
               
chr18:42744027-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
832-1100
               

               
Cow position:
               
chr18:50099665-50099935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
832-1104
               

               
Cow position:
               
chr18:33093004-33092730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
832-1104
               

               
Cow position:
               
chr18:40086751-40086474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 147
               

               
Conread position:
               
832-1104
               

               
Cow position:
               
chr18:42791654-42791928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
832-1106
               

               
Cow position:
               
chr18:33064416-33064140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 260
               

               
Conread position:
               
832-1106
               

               
Cow position:
               
chr18:51874160-51874434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
832-1107
               

               
Cow position:
               
chr18:41197929-41198206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
832-1108
               

               
Cow position:
               
chr18:50059269-50058991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
832-1116
               

               
Cow position:
               
chr18:51400296-51400584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
832-1122
               

               
Cow position:
               
chr18:41198097-41198389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
832-1124
               

               
Cow position:
               
chr18:41949078-41948784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
832-1126
               

               
Cow position:
               
chr18:41949330-41949034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
832-1126
               

               
Cow position:
               
chr18:43120053-43119757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 205
               

               
Conread position:
               
832-1127
               

               
Cow position:
               
chr18:42792494-42792791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
64, 260
               

               
Conread position:
               
832-1128
               

               
Cow position:
               
chr18:33093088-33092790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 256
               

               
Conread position:
               
836-1098
               

               
Cow position:
               
chr18:42674711-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
836-1105
               

               
Cow position:
               
chr18:50083472-50083743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
836-1106
               

               
Cow position:
               
chr18:1417856-1418128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
836-1112
               

               
Cow position:
               
chr18:43093729-43093454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
836-1128
               

               
Cow position:
               
chr18:50059097-50058803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
839-1100
               

               
Cow position:
               
chr18:50099840-50100103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
839-1104
               

               
Cow position:
               
chr18:53635263-53634996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
839-1112
               

               
Cow position:
               
chr18:50083727-50084002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
839-1116
               

               
Cow position:
               
chr18:53635347-53635068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 253
               

               
Conread position:
               
839-1116
               

               
Cow position:
               
chr18:56128818-56129097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 253
               

               
Conread position:
               
839-1124
               

               
Cow position:
               
chr18:33063905-33063618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
839-1126
               

               
Cow position:
               
chr18:44240202-44240491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
840-1123
               

               
Cow position:
               
chr18:42744355-42744070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 248
               

               
Conread position:
               
840-1128
               

               
Cow position:
               
chr18:41198357-41198647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
56, 251
               

               
Conread position:
               
841-1105
               

               
Cow position:
               
chr18:43093391-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
841-1106
               

               
Cow position:
               
chr18:42792167-42792434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 246
               

               
Conread position:
               
841-1107
               

               
Cow position:
               
chr18:40075134-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
841-1116
               

               
Cow position:
               
chr18:52012164-52011887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
841-1126
               

               
Cow position:
               
chr18:49032431-49032144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
45, 247
               

               
Conread position:
               
845-1104
               

               
Cow position:
               
chr18:52433096-52433358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 193
               

               
Conread position:
               
852-1116
               

               
Cow position:
               
chr18:14453334-14453068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
865-1123
               

               
Cow position:
               
chr18:42744747-42744490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
224, 0
               

               
Conread position:
               
869-1127
               

               
Cow position:
               
chr18:53526167-53526427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 223
               

               
Conread position:
               
870-1107
               

               
Cow position:
               
chr18:40086290-40086053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
870-1110
               

               
Cow position:
               
chr18:43168016-43168258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
870-1112
               

               
Cow position:
               
chr18:43168100-43168344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
870-1112
               

               
Cow position:
               
chr18:50848727-50848971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 222
               

               
Conread position:
               
870-1124
               

               
Cow position:
               
chr18:42675097-42674841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
870-1125
               

               
Cow position:
               
chr18:40075247-40075504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
870-1126
               

               
Cow position:
               
chr18:40086542-40086284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 222
               

               
Conread position:
               
870-1126
               

               
Cow position:
               
chr18:49032738-49032480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 222
               

               
Conread position:
               
871-1098
               

               
Cow position:
               
chr18:43120266-43120037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
871-1098
               

               
Cow position:
               
chr18:44239730-44239959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 217
               

               
Conread position:
               
871-1106
               

               
Cow position:
               
chr18:50246470-50246707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 221
               

               
Conread position:
               
871-1107
               

               
Cow position:
               
chr18:44239814-44240052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 217
               

               
Conread position:
               
871-1109
               

               
Cow position:
               
chr18:44184913-44184673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
871-1114
               

               
Cow position:
               
chr18:50271770-50272016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 221
               

               
Conread position:
               
871-1116
               

               
Cow position:
               
chr18:49032821-49032574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
871-1123
               

               
Cow position:
               
chr18:42837963-42837709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 221
               

               
Conread position:
               
871-1123
               

               
Cow position:
               
chr18:52447585-52447839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
25, 221
               

               
Conread position:
               
871-1124
               

               
Cow position:
               
chr18:42959747-42959492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
871-1124
               

               
Cow position:
               
chr18:44154481-44154223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 224
               

               
Conread position:
               
871-1126
               

               
Cow position:
               
chr18:43022342-43022085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
871-1126
               

               
Cow position:
               
chr18:43175467-43175210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
871-1126
               

               
Cow position:
               
chr18:49032485-49032228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
871-1126
               

               
Cow position:
               
chr18:55066717-55066460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 216
               

               
Conread position:
               
871-1127
               

               
Cow position:
               
chr18:50059650-50059392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 216
               

               
Conread position:
               
871-1128
               

               
Cow position:
               
chr18:41197800-41198059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 220
               

               
Conread position:
               
872-1106
               

               
Cow position:
               
chr18:33092796-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
24, 216
               

               
Conread position:
               
872-1124
               

               
Cow position:
               
chr18:42837878-42837624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
874-1087
               

               
Cow position:
               
chr18:33063786-33063569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
877-1116
               

               
Cow position:
               
chr18:51752272-51752031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 215
               

               
Conread position:
               
879-1104
               

               
Cow position:
               
chr18:50848652-50848879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 213
               

               
Conread position:
               
879-1105
               

               
Cow position:
               
chr18:42985327-42985099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
879-1106
               

               
Cow position:
               
chr18:56316114-56316343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 209
               

               
Conread position:
               
879-1112
               

               
Cow position:
               
chr18:42792457-42792692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 213
               

               
Conread position:
               
879-1124
               

               
Cow position:
               
chr18:42675256-42675009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 209
               

               
Conread position:
               
879-1126
               

               
Cow position:
               
chr18:33064117-33063868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 209
               

               
Conread position:
               
879-1127
               

               
Cow position:
               
chr18:56247418-56247170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
880-1104
               

               
Cow position:
               
chr18:40085954-40085728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
880-1106
               

               
Cow position:
               
chr18:51368200-51367972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 212
               

               
Conread position:
               
880-1108
               

               
Cow position:
               
chr18:51969816-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
880-1110
               

               
Cow position:
               
chr18:43022249-43022017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
880-1110
               

               
Cow position:
               
chr18:51752101-51751869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 212
               

               
Conread position:
               
880-1116
               

               
Cow position:
               
chr18:43120173-43119935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 207
               

               
Conread position:
               
880-1123
               

               
Cow position:
               
chr18:44398121-44397876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
880-1126
               

               
Cow position:
               
chr18:44154301-44154053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
880-1126
               

               
Cow position:
               
chr18:56248175-56247929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 210
               

               
Conread position:
               
880-1127
               

               
Cow position:
               
chr18:50059305-50059056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
881-1104
               

               
Cow position:
               
chr18:42985577-42985352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 206
               

               
Conread position:
               
882-1124
               

               
Cow position:
               
chr18:43023087-43022843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 206
               

               
Conread position:
               
882-1126
               

               
Cow position:
               
chr18:43120339-43120093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 152
               

               
Conread position:
               
892-1104
               

               
Cow position:
               
chr18:40306753-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 198
               

               
Conread position:
               
892-1104
               

               
Cow position:
               
chr18:55018380-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
892-1116
               

               
Cow position:
               
chr18:49032882-49032658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 198
               

               
Conread position:
               
892-1116
               

               
Cow position:
               
chr18:56494260-56494484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
892-1124
               

               
Cow position:
               
chr18:43048732-43048500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
893-1110
               

               
Cow position:
               
chr18:51969338-51969555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 197
               

               
Conread position:
               
896-1104
               

               
Cow position:
               
chr18:52427802-52428009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
144, 138
               

               
Conread position:
               
896-1116
               

               
Cow position:
               
chr18:56329262-56329043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
896-1116
               

               
Cow position:
               
chr18:56329682-56329463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
896-1127
               

               
Cow position:
               
chr18:52447277-52447507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
897-1126
               

               
Cow position:
               
chr18:53586411-53586181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 194
               

               
Conread position:
               
898-1076
               

               
Cow position:
               
chr18:43053372-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
898-1106
               

               
Cow position:
               
chr18:56330184-56329977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
898-1108
               

               
Cow position:
               
chr18:50849094-50849303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
898-1110
               

               
Cow position:
               
chr18:51812797-51812586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
898-1111
               

               
Cow position:
               
chr18:56329428-56329216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
898-1112
               

               
Cow position:
               
chr18:42791639-42791852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
898-1112
               

               
Cow position:
               
chr18:42827407-42827620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
898-1112
               

               
Cow position:
               
chr18:43093991-43093778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
898-1122
               

               
Cow position:
               
chr18:56316052-56316275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
898-1123
               

               
Cow position:
               
chr18:14453849-14453625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
898-1126
               

               
Cow position:
               
chr18:41949345-41949118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
43, 47
               

               
Conread position:
               
898-1127
               

               
Cow position:
               
chr18:40324881-40324653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
898-1128
               

               
Cow position:
               
chr18:42791051-42791280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
132, 112
               

               
Conread position:
               
899-1102
               

               
Cow position:
               
chr18:52447028-52447230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
899-1124
               

               
Cow position:
               
chr18:43175352-43175128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
900-1122
               

               
Cow position:
               
chr18:51839136-51838915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
900-1125
               

               
Cow position:
               
chr18:33093101-33092877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
901-1104
               

               
Cow position:
               
chr18:51368597-51368394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
911-1124
               

               
Cow position:
               
chr18:43175592-43175380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
958-1126
               

               
Cow position:
               
chr18:41949369-41949202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
960-1126
               

               
Cow position:
               
chr18:44398458-44398293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
966-1127
               

               
Cow position:
               
chr18:43048741-43048581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               
Show alignments to all cow chromosomes.