Cow genome map

Conread name: Ss1.1-Lng1-LNG010024G10.5

Conread position: 800-1125
Cow position: chr22:12431423-12431093 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 51

Conread position: 815-1123
Cow position: chr22:12432581-12432271 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 198
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 47

Conread position: 816-1126
Cow position: chr22:12385414-12385102 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 31

Conread position: 816-1126
Cow position: chr22:12458608-12458296 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 75, 272

Conread position: 817-1073
Cow position: chr22:11641196-11641454 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 6

Conread position: 817-1106
Cow position: chr22:11666616-11666907 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 30

Conread position: 817-1113
Cow position: chr22:12430982-12430685 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 193
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 79, 8

Conread position: 817-1117
Cow position: chr22:12475631-12475330 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 10

Conread position: 817-1117
Cow position: chr22:12499628-12499929 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 8

Conread position: 817-1125
Cow position: chr22:12499459-12499769 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 274

Conread position: 818-1070
Cow position: chr22:12475547-12475292 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 78, 218

Conread position: 818-1105
Cow position: chr22:12399170-12398881 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 30

Conread position: 818-1112
Cow position: chr22:11701271-11701567 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 191
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 29

Conread position: 818-1123
Cow position: chr22:12399086-12398779 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 274

Conread position: 818-1123
Cow position: chr22:12430898-12430591 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 73, 139

Conread position: 818-1124
Cow position: chr22:12399254-12398946 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 29

Conread position: 818-1125
Cow position: chr22:12475799-12475490 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 54, 30

Conread position: 818-1126
Cow position: chr22:12399422-12399112 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 49, 34

Conread position: 818-1126
Cow position: chr22:12431990-12431680 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 276

Conread position: 819-1113
Cow position: chr22:12475968-12475670 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 31

Conread position: 819-1113
Cow position: chr22:12499291-12499589 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 31

Conread position: 819-1126
Cow position: chr22:12399841-12399532 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 128

Conread position: 820-1100
Cow position: chr22:12431234-12430950 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 53

Conread position: 821-1095
Cow position: chr22:12399757-12399479 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 273

Conread position: 822-1105
Cow position: chr22:12385324-12385039 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 40, 25

Conread position: 822-1112
Cow position: chr22:12399334-12399042 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 270

Conread position: 826-1126
Cow position: chr22:12432402-12432100 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 266

Conread position: 827-1070
Cow position: chr22:11701448-11701694 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 126

Conread position: 827-1070
Cow position: chr22:12499721-12499967 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 209

Conread position: 827-1098
Cow position: chr22:12432065-12431792 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 21

Conread position: 827-1106
Cow position: chr22:12458345-12458064 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 265

Conread position: 827-1108
Cow position: chr22:12431645-12431362 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 21

Conread position: 827-1112
Cow position: chr22:12432317-12432030 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 261

Conread position: 827-1113
Cow position: chr22:12499133-12499421 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 21

Conread position: 827-1114
Cow position: chr22:12431729-12431440 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 265

Conread position: 827-1122
Cow position: chr22:12432233-12431936 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 208

Conread position: 827-1123
Cow position: chr22:12476042-12475744 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 265

Conread position: 827-1125
Cow position: chr22:11640617-11640917 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 20

Conread position: 827-1125
Cow position: chr22:12419016-12418716 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 260

Conread position: 827-1126
Cow position: chr22:12458093-12457792 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 21

Conread position: 827-1126
Cow position: chr22:12476126-12475825 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 21

Conread position: 827-1128
Cow position: chr22:12499385-12499688 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 20

Conread position: 828-1116
Cow position: chr22:11640954-11641244 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 264

Conread position: 829-1105
Cow position: chr22:12399909-12399637 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 829-1112
Cow position: chr22:12431139-12430854 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 202

Conread position: 831-1128
Cow position: chr22:12418928-12418629 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 16

Conread position: 832-1104
Cow position: chr22:12431052-12430778 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 66, 258

Conread position: 832-1104
Cow position: chr22:12431808-12431534 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 203

Conread position: 832-1112
Cow position: chr22:11641042-11641324 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 59, 258

Conread position: 832-1116
Cow position: chr22:11640874-11641160 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 115

Conread position: 832-1126
Cow position: chr22:12475701-12475405 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 16

Conread position: 832-1128
Cow position: chr22:12475869-12475571 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 260

Conread position: 836-1126
Cow position: chr22:12431300-12431008 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 12

Conread position: 839-1099
Cow position: chr22:12458417-12458155 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 9

Conread position: 839-1108
Cow position: chr22:11640797-11641068 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 12

Conread position: 840-1107
Cow position: chr22:14429754-14430023 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 56, 197

Conread position: 841-1085
Cow position: chr22:12419271-12419024 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 848-1108
Cow position: chr22:12419076-12418817 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 241, 0

Conread position: 871-1126
Cow position: chr22:12499093-12499350 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 219

Conread position: 871-1128
Cow position: chr22:12432441-12432182 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 217

Conread position: 878-1104
Cow position: chr22:11640752-11640980 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 210

Conread position: 880-1105
Cow position: chr22:12399612-12399385 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 212

Conread position: 880-1114
Cow position: chr22:12399444-12399208 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 208

Conread position: 884-1112
Cow position: chr22:11666601-11666829 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 53

Conread position: 893-1126
Cow position: chr22:12476141-12475909 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 196, 0

Conread position: 896-1106
Cow position: chr22:11701436-11701645 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 48

Conread position: 896-1112
Cow position: chr22:12476222-12476007 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 193, 0

Conread position: 896-1116
Cow position: chr22:12419297-12419078 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 189, 0

Conread position: 898-1113
Cow position: chr22:12385499-12385283 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 193

Conread position: 899-1104
Cow position: chr22:12385666-12385462 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 190, 0

Conread position: 899-1126
Cow position: chr22:12476387-12476161 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 190, 0

Conread position: 899-1126
Cow position: chr22:12498872-12499098 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 190, 0

Show alignments to all cow chromosomes.