Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010024G10.5 |
| Conread position: | 27-386 |
| Cow position: | chr24:17045884-17045520 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 255 |
| Conread position: | 406-625 |
| Cow position: | chr24:17045044-17044827 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 628-1127 |
| Cow position: | chr24:17012981-17013476 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 326 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 632-1128 |
| Cow position: | chr24:17036812-17036317 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 0 |
| Conread position: | 775-1125 |
| Cow position: | chr24:17078220-17077867 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 5, 318 |
| Conread position: | 817-1128 |
| Cow position: | chr24:17078260-17077948 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 818-1116 |
| Cow position: | chr24:17070628-17070928 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 818-1124 |
| Cow position: | chr24:17035285-17034977 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 818-1126 |
| Cow position: | chr24:17036377-17036067 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 274 |
| Conread position: | 818-1127 |
| Cow position: | chr24:17035453-17035142 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 818-1127 |
| Cow position: | chr24:17036293-17035982 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 273 |
| Conread position: | 820-1123 |
| Cow position: | chr24:17035537-17035230 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 274 |
| Conread position: | 820-1123 |
| Cow position: | chr24:17035873-17035566 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 274 |
| Conread position: | 820-1127 |
| Cow position: | chr24:17036041-17035730 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 270 |
| Conread position: | 822-1063 |
| Cow position: | chr24:17077752-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 822-1123 |
| Cow position: | chr24:17077920-17077617 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 76, 270 |
| Conread position: | 822-1126 |
| Cow position: | chr24:17035701-17035395 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 269 |
| Conread position: | 822-1126 |
| Cow position: | chr24:17035953-17035647 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 827-1061 |
| Cow position: | chr24:17070805-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 828-1125 |
| Cow position: | chr24:17077998-17077699 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 831-1127 |
| Cow position: | chr24:17035776-17035478 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 260 |
| Conread position: | 832-1090 |
| Cow position: | chr24:17013263-17013523 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 832-1116 |
| Cow position: | chr24:17077826-17077540 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 832-1125 |
| Cow position: | chr24:17070726-17071021 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 846-1126 |
| Cow position: | chr24:17070571-17070854 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 8, 247 |
| Conread position: | 848-1125 |
| Cow position: | chr24:17035591-17035312 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 239 |
| Conread position: | 848-1125 |
| Cow position: | chr24:17036431-17036152 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 43, 240 |
| Conread position: | 866-1124 |
| Cow position: | chr24:17035321-17035061 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 25, 226 |
| Conread position: | 871-1124 |
| Cow position: | chr24:17070513-17070768 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 221 |
| Conread position: | 872-1126 |
| Cow position: | chr24:17036155-17035899 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 220 |
| Conread position: | 873-1125 |
| Cow position: | chr24:17070431-17070685 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 219 |
| Conread position: | 891-1124 |
| Cow position: | chr24:16986423-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 198, 0 |
Show alignments to all cow chromosomes.