Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010024G10.5 |
| Conread position: | 794-1104 |
| Cow position: | chr28:9299198-9299510 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 796-1127 |
| Cow position: | chr28:7810408-7810735 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 814-1116 |
| Cow position: | chr28:34695910-34696213 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 814-1126 |
| Cow position: | chr28:7758406-7758719 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 815-1116 |
| Cow position: | chr28:33210311-33210614 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 817-1089 |
| Cow position: | chr28:7758493-7758767 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 817-1099 |
| Cow position: | chr28:11333969-11333685 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 274 |
| Conread position: | 818-1127 |
| Cow position: | chr28:9253188-9253499 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 819-1122 |
| Cow position: | chr28:7757754-7758059 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 820-1093 |
| Cow position: | chr28:11333800-11333523 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 820-1107 |
| Cow position: | chr28:34679475-34679181 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 822-1105 |
| Cow position: | chr28:7757673-7757958 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 270 |
| Conread position: | 822-1122 |
| Cow position: | chr28:7757925-7758227 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 822-1126 |
| Cow position: | chr28:9253108-9253414 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 270 |
| Conread position: | 822-1127 |
| Cow position: | chr28:9253276-9253583 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 824-1105 |
| Cow position: | chr28:9298574-9298855 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 826-1099 |
| Cow position: | chr28:7758333-7758608 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 70, 266 |
| Conread position: | 827-1108 |
| Cow position: | chr28:7810601-7810884 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 827-1112 |
| Cow position: | chr28:7758014-7758301 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 827-1123 |
| Cow position: | chr28:34696006-34696304 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 262 |
| Conread position: | 832-1078 |
| Cow position: | chr28:9253370-9253621 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 832-1116 |
| Cow position: | chr28:9253034-9253320 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 832-1124 |
| Cow position: | chr28:7757515-7757809 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 836-1083 |
| Cow position: | chr28:7810283-7810533 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 839-1122 |
| Cow position: | chr28:11334199-11333914 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 252 |
| Conread position: | 839-1124 |
| Cow position: | chr28:7757606-7757893 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 879-1110 |
| Cow position: | chr28:7757394-7757627 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 18, 178 |
| Conread position: | 896-1116 |
| Cow position: | chr28:34696246-34696465 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 896-1116 |
| Cow position: | chr28:34696330-34696549 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 898-1126 |
| Cow position: | chr28:33210228-33210455 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 199, 191 |
| Conread position: | 917-1108 |
| Cow position: | chr28:7810283-7810473 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 172, 0 |
Show alignments to all cow chromosomes.