Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010024G10.5 |
| Conread position: | 817-1125 |
| Cow position: | chr7:3180034-3180343 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 817-1125 |
| Cow position: | chr7:18390415-18390724 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 817-1128 |
| Cow position: | chr7:42879192-42878879 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 818-1116 |
| Cow position: | chr7:11601102-11600802 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 78, 273 |
| Conread position: | 818-1125 |
| Cow position: | chr7:1014526-1014829 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 98 |
| Conread position: | 818-1128 |
| Cow position: | chr7:1014274-1014586 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 820-1104 |
| Cow position: | chr7:8324902-8325190 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 820-1105 |
| Cow position: | chr7:3180118-3180407 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 274 |
| Conread position: | 820-1116 |
| Cow position: | chr7:1015192-1015494 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 820-1128 |
| Cow position: | chr7:3179952-3180262 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 272 |
| Conread position: | 822-1122 |
| Cow position: | chr7:42878767-42878465 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 74, 129 |
| Conread position: | 822-1125 |
| Cow position: | chr7:18390167-18390472 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 270 |
| Conread position: | 822-1126 |
| Cow position: | chr7:3179786-3180092 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 823-1124 |
| Cow position: | chr7:11600845-11600542 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 824-1112 |
| Cow position: | chr7:42879019-42878728 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 7, 269 |
| Conread position: | 827-1105 |
| Cow position: | chr7:3180547-3180825 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 827-1106 |
| Cow position: | chr7:11600757-11600476 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 264 |
| Conread position: | 827-1124 |
| Cow position: | chr7:3180463-3180762 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 827-1126 |
| Cow position: | chr7:1014949-1015250 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 827-1126 |
| Cow position: | chr7:18390508-18390809 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 827-1126 |
| Cow position: | chr7:42878846-42878545 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 827-1128 |
| Cow position: | chr7:42879098-42878795 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 69, 265 |
| Conread position: | 828-1126 |
| Cow position: | chr7:1014782-1015082 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 208 |
| Conread position: | 829-1104 |
| Cow position: | chr7:3179709-3179986 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 163 |
| Conread position: | 832-1101 |
| Cow position: | chr7:1439906-1440176 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 832-1104 |
| Cow position: | chr7:3179880-3180154 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 256 |
| Conread position: | 832-1107 |
| Cow position: | chr7:1014870-1015147 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 64, 260 |
| Conread position: | 832-1128 |
| Cow position: | chr7:42878505-42878206 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 832-1128 |
| Cow position: | chr7:42879261-42878963 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 64, 260 |
| Conread position: | 836-1117 |
| Cow position: | chr7:18390349-18390632 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 255 |
| Conread position: | 841-1126 |
| Cow position: | chr7:42878664-42878377 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 251 |
| Conread position: | 870-1083 |
| Cow position: | chr7:11601134-11600918 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 871-1128 |
| Cow position: | chr7:42878886-42878627 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 221 |
| Conread position: | 880-1106 |
| Cow position: | chr7:8277659-8277887 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 64 |
| Conread position: | 886-1106 |
| Cow position: | chr7:11601202-11600980 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 206 |
| Conread position: | 897-1106 |
| Cow position: | chr7:18390161-18390369 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 897-1128 |
| Cow position: | chr7:42879277-42879047 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 899-1106 |
| Cow position: | chr7:1014688-1014894 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 190, 0 |
Show alignments to all cow chromosomes.