Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010024G10.5 |
| Conread position: | 816-1128 |
| Cow position: | chr8:46816045-46816358 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 817-1104 |
| Cow position: | chr8:46815961-46816250 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 275 |
| Conread position: | 818-1064 |
| Cow position: | chr8:55581411-55581660 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 818-1105 |
| Cow position: | chr8:55581159-55581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 270 |
| Conread position: | 818-1108 |
| Cow position: | chr8:48407461-48407169 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 73, 270 |
| Conread position: | 818-1110 |
| Cow position: | chr8:45201607-45201901 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 818-1110 |
| Cow position: | chr8:55581075-55581369 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 78, 274 |
| Conread position: | 818-1112 |
| Cow position: | chr8:45201523-45201819 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 818-1123 |
| Cow position: | chr8:48406957-48406650 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 79, 274 |
| Conread position: | 818-1124 |
| Cow position: | chr8:45201355-45201663 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 818-1127 |
| Cow position: | chr8:46816970-46817281 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 79, 274 |
| Conread position: | 820-1124 |
| Cow position: | chr8:45201273-45201579 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 820-1125 |
| Cow position: | chr8:48407375-48407068 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 77, 272 |
| Conread position: | 820-1127 |
| Cow position: | chr8:46816384-46816693 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 272 |
| Conread position: | 822-1106 |
| Cow position: | chr8:45201107-45201393 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 822-1110 |
| Cow position: | chr8:48407205-48406915 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 73, 270 |
| Conread position: | 822-1112 |
| Cow position: | chr8:46816890-46817182 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 270 |
| Conread position: | 822-1123 |
| Cow position: | chr8:46816470-46816773 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 270 |
| Conread position: | 822-1126 |
| Cow position: | chr8:48406869-48406563 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 116 |
| Conread position: | 822-1126 |
| Cow position: | chr8:48407289-48406983 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 826-1111 |
| Cow position: | chr8:48407621-48407334 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 265 |
| Conread position: | 827-1104 |
| Cow position: | chr8:46817063-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 827-1112 |
| Cow position: | chr8:45201448-45201735 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 827-1126 |
| Cow position: | chr8:48406696-48406395 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 829-1124 |
| Cow position: | chr8:55581002-55581299 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 832-1089 |
| Cow position: | chr8:45201705-45201965 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 832-1100 |
| Cow position: | chr8:48407027-48406756 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 832-1106 |
| Cow position: | chr8:45200949-45201225 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 64, 260 |
| Conread position: | 832-1110 |
| Cow position: | chr8:45201033-45201313 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 832-1112 |
| Cow position: | chr8:45201201-45201483 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 832-1112 |
| Cow position: | chr8:46816816-46817098 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 832-1126 |
| Cow position: | chr8:48407531-48407235 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 66, 260 |
| Conread position: | 838-1126 |
| Cow position: | chr8:55580843-55581133 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 254 |
| Conread position: | 839-1104 |
| Cow position: | chr8:6958058-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 839-1109 |
| Cow position: | chr8:46816655-46816927 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 839-1112 |
| Cow position: | chr8:46816319-46816594 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 57, 253 |
| Conread position: | 840-1111 |
| Cow position: | chr8:48406599-48406326 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 250 |
| Conread position: | 880-1116 |
| Cow position: | chr8:55581389-55581627 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 208 |
| Conread position: | 896-1106 |
| Cow position: | chr8:46816295-46816504 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 897-1126 |
| Cow position: | chr8:48406707-48406479 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 898-1104 |
| Cow position: | chr8:46816801-46817006 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 160, 153 |
| Conread position: | 901-1126 |
| Cow position: | chr8:48406451-48406218 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 125, 135 |
Show alignments to all cow chromosomes.