Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1081-1289 |
| Cow position: | chr12:28214598-28214400 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 1082-1206 |
| Cow position: | chr12:20792038-20792166 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1082-1229 |
| Cow position: | chr12:25514605-25514454 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1082-1255 |
| Cow position: | chr12:29801697-29801522 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 1082-1264 |
| Cow position: | chr12:42854270-42854095 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 151, 31 |
| Conread position: | 1082-1271 |
| Cow position: | chr12:8467687-8467874 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 1082-1278 |
| Cow position: | chr12:29758981-29759178 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 1082-1280 |
| Cow position: | chr12:23499322-23499126 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 1082-1281 |
| Cow position: | chr12:27423762-27423567 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 1082-1282 |
| Cow position: | chr12:1993064-1993268 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 1082-1289 |
| Cow position: | chr12:36974923-36975120 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 1082-1289 |
| Cow position: | chr12:38223034-38223248 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1082-1295 |
| Cow position: | chr12:2837755-2837957 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 1082-1296 |
| Cow position: | chr12:11306130-11306345 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 141 |
| Conread position: | 1082-1296 |
| Cow position: | chr12:33277112-33277322 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 1087-1280 |
| Cow position: | chr12:10161446-10161645 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 1088-1257 |
| Cow position: | chr12:25419521-25419688 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1088-1282 |
| Cow position: | chr12:26310608-26310787 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1088-1286 |
| Cow position: | chr12:34476095-34475907 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1088-1289 |
| Cow position: | chr12:7024944-7025147 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 1089-1289 |
| Cow position: | chr12:7086599-7086408 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 1090-1275 |
| Cow position: | chr12:20226882-20227066 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 1092-1289 |
| Cow position: | chr12:12763715-12763909 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 87 |
| Conread position: | 1092-1294 |
| Cow position: | chr12:33350829-33350636 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 1093-1282 |
| Cow position: | chr12:5896573-5896769 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 1105-1281 |
| Cow position: | chr12:16962078-16961905 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 1138-1289 |
| Cow position: | chr12:8767185-8767330 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.