Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1082-1212 |
| Cow position: | chr14:44787353-44787488 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1082-1250 |
| Cow position: | chr14:10950005-10949840 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 1082-1274 |
| Cow position: | chr14:36420538-36420352 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 1082-1275 |
| Cow position: | chr14:28007114-28007304 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 1082-1282 |
| Cow position: | chr14:17556133-17556333 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 1082-1282 |
| Cow position: | chr14:35605816-35605620 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 1082-1282 |
| Cow position: | chr14:37983904-37983708 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 118 |
| Conread position: | 1082-1282 |
| Cow position: | chr14:47880620-47880423 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 1082-1285 |
| Cow position: | chr14:50650042-50650248 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 1082-1289 |
| Cow position: | chr14:17051077-17051279 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 1082-1289 |
| Cow position: | chr14:19735264-19735057 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 1082-1295 |
| Cow position: | chr14:15662723-15662512 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 1082-1295 |
| Cow position: | chr14:30134346-30134130 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 144 |
| Conread position: | 1082-1296 |
| Cow position: | chr14:38722371-38722575 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 1083-1266 |
| Cow position: | chr14:37999904-38000079 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 1085-1270 |
| Cow position: | chr14:32574647-32574838 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 1086-1282 |
| Cow position: | chr14:40243673-40243872 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1088-1192 |
| Cow position: | chr14:29481311-29481204 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1088-1260 |
| Cow position: | chr14:35685592-35685424 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 1088-1282 |
| Cow position: | chr14:32904125-32903939 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 1088-1289 |
| Cow position: | chr14:19399369-19399567 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 1088-1289 |
| Cow position: | chr14:25994512-25994320 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1090-1226 |
| Cow position: | chr14:44771588-44771722 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 1091-1282 |
| Cow position: | chr14:41712532-41712713 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 1092-1280 |
| Cow position: | chr14:42693156-42693339 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 1093-1277 |
| Cow position: | chr14:30762175-30762347 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 1094-1282 |
| Cow position: | chr14:15011964-15011779 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 1095-1279 |
| Cow position: | chr14:34912438-34912258 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 1100-1289 |
| Cow position: | chr14:24738757-24738952 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1103-1280 |
| Cow position: | chr14:9500384-9500219 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 1111-1251 |
| Cow position: | chr14:23938734-23938594 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 1126-1295 |
| Cow position: | chr14:42258503-42258668 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1134-1282 |
| Cow position: | chr14:19340138-19339996 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1134-1296 |
| Cow position: | chr14:46980458-46980302 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1141-1292 |
| Cow position: | chr14:12644575-12644429 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 53 |
| Conread position: | 1152-1282 |
| Cow position: | chr14:24783588-24783462 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1163-1289 |
| Cow position: | chr14:21864430-21864304 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.