Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1081-1281 |
| Cow position: | chr16:30572082-30572283 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 1081-1289 |
| Cow position: | chr16:41680219-41680425 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 1081-1295 |
| Cow position: | chr16:47781844-47781626 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 1082-1254 |
| Cow position: | chr16:31374364-31374536 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 116 |
| Conread position: | 1082-1264 |
| Cow position: | chr16:17365632-17365451 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 96 |
| Conread position: | 1082-1271 |
| Cow position: | chr16:32352657-32352472 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 1082-1275 |
| Cow position: | chr16:5131237-5131428 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 1082-1281 |
| Cow position: | chr16:37441370-37441564 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 1082-1282 |
| Cow position: | chr16:48894283-48894477 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 1082-1289 |
| Cow position: | chr16:2722501-2722710 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 153 |
| Conread position: | 1082-1289 |
| Cow position: | chr16:12243010-12243206 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 1082-1289 |
| Cow position: | chr16:14423446-14423240 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 104 |
| Conread position: | 1082-1289 |
| Cow position: | chr16:56373340-56373539 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1082-1291 |
| Cow position: | chr16:43850286-43850496 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 114 |
| Conread position: | 1082-1291 |
| Cow position: | chr16:52649978-52650182 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 1082-1294 |
| Cow position: | chr16:16119002-16118789 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 1082-1295 |
| Cow position: | chr16:14799198-14799406 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1082-1296 |
| Cow position: | chr16:15509473-15509266 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 1083-1289 |
| Cow position: | chr16:37508622-37508422 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 1083-1296 |
| Cow position: | chr16:13044388-13044177 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 1087-1281 |
| Cow position: | chr16:608351-608539 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 1088-1269 |
| Cow position: | chr16:14084614-14084794 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 1088-1274 |
| Cow position: | chr16:43849984-43850162 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 1088-1280 |
| Cow position: | chr16:24038634-24038440 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 1088-1289 |
| Cow position: | chr16:2371274-2371459 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1090-1282 |
| Cow position: | chr16:4854440-4854620 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1091-1289 |
| Cow position: | chr16:23878885-23878682 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 1092-1282 |
| Cow position: | chr16:45057946-45057753 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 30, 141 |
| Conread position: | 1094-1253 |
| Cow position: | chr16:29204356-29204515 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 100 |
| Conread position: | 1107-1289 |
| Cow position: | chr16:30109308-30109492 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 127 |
| Conread position: | 1113-1277 |
| Cow position: | chr16:9703097-9703267 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 1135-1281 |
| Cow position: | chr16:37527139-37527000 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1142-1254 |
| Cow position: | chr16:19035070-19035179 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1168-1295 |
| Cow position: | chr16:42406320-42406192 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.