Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1081-1284 |
| Cow position: | chr17:10261692-10261498 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 1081-1295 |
| Cow position: | chr17:3223934-3223732 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 1082-1196 |
| Cow position: | chr17:13236094-13235977 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1082-1234 |
| Cow position: | chr17:4625341-4625196 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 1082-1277 |
| Cow position: | chr17:701979-701783 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 1082-1277 |
| Cow position: | chr17:18417653-18417853 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 1082-1278 |
| Cow position: | chr17:26481406-26481211 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 1082-1280 |
| Cow position: | chr17:6980154-6980365 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1082-1282 |
| Cow position: | chr17:28847064-28847264 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 1082-1289 |
| Cow position: | chr17:7211195-7210998 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 1082-1289 |
| Cow position: | chr17:15451079-15450875 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 1082-1289 |
| Cow position: | chr17:19789297-19789494 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 1082-1296 |
| Cow position: | chr17:33271198-33271407 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 1083-1249 |
| Cow position: | chr17:43143213-43143378 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 1083-1289 |
| Cow position: | chr17:12842846-12842641 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 1086-1273 |
| Cow position: | chr17:10850779-10850956 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1087-1269 |
| Cow position: | chr17:404435-404254 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 1088-1282 |
| Cow position: | chr17:3849306-3849116 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 1088-1289 |
| Cow position: | chr17:13703871-13703672 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 107 |
| Conread position: | 1088-1294 |
| Cow position: | chr17:11225759-11225557 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 1091-1289 |
| Cow position: | chr17:2736288-2736095 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 1092-1282 |
| Cow position: | chr17:32451082-32451278 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1094-1265 |
| Cow position: | chr17:30330890-30330729 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 1094-1295 |
| Cow position: | chr17:1309690-1309894 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 1094-1296 |
| Cow position: | chr17:27623410-27623605 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 1158-1296 |
| Cow position: | chr17:25117477-25117338 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 35 |
| Conread position: | 1161-1289 |
| Cow position: | chr17:36149918-36149792 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 75 |
Show alignments to all cow chromosomes.