Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1082-1223 |
| Cow position: | chr18:51332104-51331962 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 1082-1234 |
| Cow position: | chr18:36456549-36456398 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 1082-1242 |
| Cow position: | chr18:52871119-52870962 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 1082-1255 |
| Cow position: | chr18:5060024-5060199 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 1082-1273 |
| Cow position: | chr18:27405395-27405212 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 1082-1282 |
| Cow position: | chr18:49436862-49436664 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 115 |
| Conread position: | 1082-1282 |
| Cow position: | chr18:50242568-50242372 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 1082-1289 |
| Cow position: | chr18:16259776-16259569 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 1082-1289 |
| Cow position: | chr18:22433270-22433482 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 1082-1291 |
| Cow position: | chr18:25846526-25846729 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 1082-1292 |
| Cow position: | chr18:39474756-39474971 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 1082-1295 |
| Cow position: | chr18:1701093-1700890 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 114 |
| Conread position: | 1082-1295 |
| Cow position: | chr18:24663937-24664143 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 1082-1296 |
| Cow position: | chr18:32861161-32860949 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 1082-1296 |
| Cow position: | chr18:50880995-50880782 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 49, 116 |
| Conread position: | 1084-1280 |
| Cow position: | chr18:23316260-23316459 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 1088-1277 |
| Cow position: | chr18:28086082-28085893 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 1088-1277 |
| Cow position: | chr18:48952768-48952585 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 1088-1289 |
| Cow position: | chr18:53029209-53029022 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 1090-1295 |
| Cow position: | chr18:53047550-53047755 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 1094-1256 |
| Cow position: | chr18:8170922-8170758 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 1121-1289 |
| Cow position: | chr18:22064893-22065059 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 1152-1289 |
| Cow position: | chr18:35471358-35471499 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1159-1282 |
| Cow position: | chr18:21880013-21880134 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1168-1279 |
| Cow position: | chr18:31394149-31394039 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.