Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1081-1276 |
| Cow position: | chr19:6478280-6478477 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 116 |
| Conread position: | 1082-1218 |
| Cow position: | chr19:39299363-39299502 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 1082-1250 |
| Cow position: | chr19:28560275-28560453 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 1082-1254 |
| Cow position: | chr19:36479362-36479200 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 1082-1271 |
| Cow position: | chr19:33590254-33590058 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 1082-1280 |
| Cow position: | chr19:30051478-30051668 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1082-1281 |
| Cow position: | chr19:30188249-30188451 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 1082-1282 |
| Cow position: | chr19:4601037-4600844 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 1082-1289 |
| Cow position: | chr19:25846840-25846644 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1082-1289 |
| Cow position: | chr19:36388408-36388598 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 1082-1294 |
| Cow position: | chr19:41504501-41504289 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 1082-1295 |
| Cow position: | chr19:6362819-6362605 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 48, 112 |
| Conread position: | 1082-1295 |
| Cow position: | chr19:47772552-47772345 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 1083-1213 |
| Cow position: | chr19:12478015-12478148 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 52, 130 |
| Conread position: | 1083-1213 |
| Cow position: | chr19:35826932-35826802 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 1084-1280 |
| Cow position: | chr19:19242615-19242412 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 118 |
| Conread position: | 1086-1254 |
| Cow position: | chr19:30385299-30385131 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 1087-1289 |
| Cow position: | chr19:4548126-4548324 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 1088-1270 |
| Cow position: | chr19:30349706-30349881 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 180, 20 |
| Conread position: | 1088-1279 |
| Cow position: | chr19:30880344-30880157 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 1088-1279 |
| Cow position: | chr19:35026645-35026832 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1088-1281 |
| Cow position: | chr19:55898562-55898373 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 1088-1282 |
| Cow position: | chr19:55418573-55418393 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1089-1282 |
| Cow position: | chr19:22670334-22670525 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 1090-1286 |
| Cow position: | chr19:30746945-30746745 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 177 |
| Conread position: | 1090-1289 |
| Cow position: | chr19:13448689-13448490 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 1091-1226 |
| Cow position: | chr19:14533955-14534089 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 1092-1291 |
| Cow position: | chr19:28605829-28606028 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 1097-1266 |
| Cow position: | chr19:20700850-20700679 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 40, 127 |
| Conread position: | 1108-1296 |
| Cow position: | chr19:51070380-51070557 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1121-1296 |
| Cow position: | chr19:49484247-49484074 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 1137-1282 |
| Cow position: | chr19:35871781-35871920 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1153-1282 |
| Cow position: | chr19:50843730-50843608 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1165-1282 |
| Cow position: | chr19:3082526-3082411 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.