Cow genome map

Conread name: Ss1.1-Lng1-LNG010027H09.5

Conread position: 1071-1282
Cow position: chr2:38583362-38583575 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 61, 124

Conread position: 1078-1289
Cow position: chr2:7365671-7365879 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 8

Conread position: 1081-1216
Cow position: chr2:18760029-18759892 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 74

Conread position: 1081-1295
Cow position: chr2:7212338-7212131 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 182, 48

Conread position: 1082-1226
Cow position: chr2:13048752-13048609 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 103

Conread position: 1082-1231
Cow position: chr2:73204887-73205036 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 55, 104

Conread position: 1082-1233
Cow position: chr2:53280927-53280772 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 116

Conread position: 1082-1242
Cow position: chr2:72599361-72599197 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 135

Conread position: 1082-1242
Cow position: chr2:74387582-74387746 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 140
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 53, 81

Conread position: 1082-1266
Cow position: chr2:23062377-23062555 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 102

Conread position: 1082-1278
Cow position: chr2:14037174-14037365 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 95

Conread position: 1082-1279
Cow position: chr2:9710008-9709814 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 84

Conread position: 1082-1279
Cow position: chr2:47746765-47746580 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 71

Conread position: 1082-1279
Cow position: chr2:62463447-62463646 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 55, 106

Conread position: 1082-1280
Cow position: chr2:15273343-15273530 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1082-1280
Cow position: chr2:63287610-63287796 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 92

Conread position: 1082-1281
Cow position: chr2:12777032-12777221 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 100

Conread position: 1082-1281
Cow position: chr2:43344741-43344941 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 115

Conread position: 1082-1281
Cow position: chr2:44983122-44983322 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 55, 115

Conread position: 1082-1282
Cow position: chr2:7778942-7779127 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 68

Conread position: 1082-1282
Cow position: chr2:49441378-49441179 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 73

Conread position: 1082-1282
Cow position: chr2:53716442-53716636 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 48, 32

Conread position: 1082-1282
Cow position: chr2:56822788-56822982 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 33

Conread position: 1082-1286
Cow position: chr2:41491188-41490987 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 54, 114

Conread position: 1082-1289
Cow position: chr2:5767507-5767703 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 25

Conread position: 1082-1289
Cow position: chr2:13685135-13684940 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 1082-1289
Cow position: chr2:18274119-18274325 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 114

Conread position: 1082-1289
Cow position: chr2:31420540-31420335 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 82

Conread position: 1082-1289
Cow position: chr2:46130386-46130592 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 69

Conread position: 1082-1289
Cow position: chr2:52183493-52183294 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 82

Conread position: 1082-1289
Cow position: chr2:82827834-82828033 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 82

Conread position: 1082-1293
Cow position: chr2:38805806-38806017 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 107

Conread position: 1082-1295
Cow position: chr2:33790937-33791145 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 1082-1295
Cow position: chr2:80603782-80603995 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 43, 114

Conread position: 1082-1296
Cow position: chr2:19750875-19750664 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 144, 27

Conread position: 1083-1255
Cow position: chr2:39412192-39412029 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 1086-1254
Cow position: chr2:51826632-51826787 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 1086-1290
Cow position: chr2:19130689-19130496 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 1087-1280
Cow position: chr2:3181976-3182170 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 49, 22

Conread position: 1088-1281
Cow position: chr2:9043741-9043550 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 108

Conread position: 1091-1282
Cow position: chr2:41417694-41417883 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 105

Conread position: 1099-1282
Cow position: chr2:3730640-3730457 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 98

Conread position: 1104-1279
Cow position: chr2:32393918-32393752 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 123

Conread position: 1106-1273
Cow position: chr2:40370251-40370408 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 75

Conread position: 1107-1289
Cow position: chr2:4927551-4927726 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1109-1282
Cow position: chr2:57501748-57501576 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 69

Conread position: 1110-1281
Cow position: chr2:20282012-20281844 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 66

Conread position: 1134-1271
Cow position: chr2:54890751-54890618 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1134-1292
Cow position: chr2:76054902-76055054 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 1144-1281
Cow position: chr2:42286017-42286148 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 1145-1295
Cow position: chr2:77968028-77968175 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 49

Show alignments to all cow chromosomes.