Cow genome map
Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
Conread position: | 1071-1282 |
Cow position: | chr2:38583362-38583575 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 171 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 61, 124 |
Conread position: | 1078-1289 |
Cow position: | chr2:7365671-7365879 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 59, 8 |
Conread position: | 1081-1216 |
Cow position: | chr2:18760029-18759892 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 33, 74 |
Conread position: | 1081-1295 |
Cow position: | chr2:7212338-7212131 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 182, 48 |
Conread position: | 1082-1226 |
Cow position: | chr2:13048752-13048609 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 53, 103 |
Conread position: | 1082-1231 |
Cow position: | chr2:73204887-73205036 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 55, 104 |
Conread position: | 1082-1233 |
Cow position: | chr2:53280927-53280772 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 123 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 32, 116 |
Conread position: | 1082-1242 |
Cow position: | chr2:72599361-72599197 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 50, 135 |
Conread position: | 1082-1242 |
Cow position: | chr2:74387582-74387746 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 140 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 53, 81 |
Conread position: | 1082-1266 |
Cow position: | chr2:23062377-23062555 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 52, 102 |
Conread position: | 1082-1278 |
Cow position: | chr2:14037174-14037365 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 154 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 54, 95 |
Conread position: | 1082-1279 |
Cow position: | chr2:9710008-9709814 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 150 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 55, 84 |
Conread position: | 1082-1279 |
Cow position: | chr2:47746765-47746580 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 151 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 53, 71 |
Conread position: | 1082-1279 |
Cow position: | chr2:62463447-62463646 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 156 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 55, 106 |
Conread position: | 1082-1280 |
Cow position: | chr2:15273343-15273530 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 142 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 1082-1280 |
Cow position: | chr2:63287610-63287796 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 148 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 55, 92 |
Conread position: | 1082-1281 |
Cow position: | chr2:12777032-12777221 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 54, 100 |
Conread position: | 1082-1281 |
Cow position: | chr2:43344741-43344941 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 48, 115 |
Conread position: | 1082-1281 |
Cow position: | chr2:44983122-44983322 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 161 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 55, 115 |
Conread position: | 1082-1282 |
Cow position: | chr2:7778942-7779127 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 55, 68 |
Conread position: | 1082-1282 |
Cow position: | chr2:49441378-49441179 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 55, 73 |
Conread position: | 1082-1282 |
Cow position: | chr2:53716442-53716636 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 164 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 48, 32 |
Conread position: | 1082-1282 |
Cow position: | chr2:56822788-56822982 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 55, 33 |
Conread position: | 1082-1286 |
Cow position: | chr2:41491188-41490987 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 165 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 54, 114 |
Conread position: | 1082-1289 |
Cow position: | chr2:5767507-5767703 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 25 |
Conread position: | 1082-1289 |
Cow position: | chr2:13685135-13684940 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 166 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 1082-1289 |
Cow position: | chr2:18274119-18274325 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 161 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 49, 114 |
Conread position: | 1082-1289 |
Cow position: | chr2:31420540-31420335 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 54, 82 |
Conread position: | 1082-1289 |
Cow position: | chr2:46130386-46130592 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 155 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 55, 69 |
Conread position: | 1082-1289 |
Cow position: | chr2:52183493-52183294 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 164 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 55, 82 |
Conread position: | 1082-1289 |
Cow position: | chr2:82827834-82828033 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 167 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 54, 82 |
Conread position: | 1082-1293 |
Cow position: | chr2:38805806-38806017 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 157 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 56, 107 |
Conread position: | 1082-1295 |
Cow position: | chr2:33790937-33791145 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 159 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1082-1295 |
Cow position: | chr2:80603782-80603995 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 165 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 43, 114 |
Conread position: | 1082-1296 |
Cow position: | chr2:19750875-19750664 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 171 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 1083-1255 |
Cow position: | chr2:39412192-39412029 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 1086-1254 |
Cow position: | chr2:51826632-51826787 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 133 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1086-1290 |
Cow position: | chr2:19130689-19130496 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 1087-1280 |
Cow position: | chr2:3181976-3182170 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 155 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 49, 22 |
Conread position: | 1088-1281 |
Cow position: | chr2:9043741-9043550 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 108 |
Conread position: | 1091-1282 |
Cow position: | chr2:41417694-41417883 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 157 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 46, 105 |
Conread position: | 1099-1282 |
Cow position: | chr2:3730640-3730457 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 151 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 39, 98 |
Conread position: | 1104-1279 |
Cow position: | chr2:32393918-32393752 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 33, 123 |
Conread position: | 1106-1273 |
Cow position: | chr2:40370251-40370408 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 30, 75 |
Conread position: | 1107-1289 |
Cow position: | chr2:4927551-4927726 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 130 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1109-1282 |
Cow position: | chr2:57501748-57501576 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 27, 69 |
Conread position: | 1110-1281 |
Cow position: | chr2:20282012-20281844 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 132 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 1134-1271 |
Cow position: | chr2:54890751-54890618 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1134-1292 |
Cow position: | chr2:76054902-76055054 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1144-1281 |
Cow position: | chr2:42286017-42286148 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 112 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1145-1295 |
Cow position: | chr2:77968028-77968175 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 121 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 24, 49 |
Show alignments to all cow chromosomes.