Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1074-1281 |
| Cow position: | chr20:22420206-22420406 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 102, 117 |
| Conread position: | 1082-1225 |
| Cow position: | chr20:17473004-17473144 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 1082-1242 |
| Cow position: | chr20:21300878-21301036 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 1082-1249 |
| Cow position: | chr20:887515-887351 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 1082-1256 |
| Cow position: | chr20:20064062-20064237 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 1082-1280 |
| Cow position: | chr20:7801546-7801733 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 1082-1280 |
| Cow position: | chr20:36988005-36988200 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 1082-1281 |
| Cow position: | chr20:3376717-3376915 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 1082-1282 |
| Cow position: | chr20:5668188-5668389 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 1082-1282 |
| Cow position: | chr20:13588566-13588764 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1082-1282 |
| Cow position: | chr20:20350206-20350398 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 1082-1282 |
| Cow position: | chr20:33154391-33154584 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 1082-1296 |
| Cow position: | chr20:14864280-14864488 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 1086-1296 |
| Cow position: | chr20:15147410-15147612 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 52, 110 |
| Conread position: | 1088-1271 |
| Cow position: | chr20:20071963-20072147 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 1088-1277 |
| Cow position: | chr20:2858922-2858742 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 1088-1282 |
| Cow position: | chr20:31098290-31098100 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 1089-1279 |
| Cow position: | chr20:27844611-27844413 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 1093-1281 |
| Cow position: | chr20:23421781-23421967 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 1093-1281 |
| Cow position: | chr20:30285943-30285759 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 1093-1295 |
| Cow position: | chr20:21001965-21002158 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 1094-1281 |
| Cow position: | chr20:22919578-22919760 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 1101-1280 |
| Cow position: | chr20:7284427-7284251 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 1101-1285 |
| Cow position: | chr20:10722884-10722705 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 118 |
| Conread position: | 1109-1273 |
| Cow position: | chr20:31563415-31563578 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 1109-1282 |
| Cow position: | chr20:23400846-23400676 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 1117-1292 |
| Cow position: | chr20:9919027-9918857 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 1152-1276 |
| Cow position: | chr20:36706943-36707066 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1154-1290 |
| Cow position: | chr20:27977190-27977325 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 29 |
| Conread position: | 1183-1296 |
| Cow position: | chr20:25294097-25293984 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 19 |
Show alignments to all cow chromosomes.