Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1070-1282 |
| Cow position: | chr23:34514331-34514538 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1080-1295 |
| Cow position: | chr23:36483879-36484086 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 1081-1292 |
| Cow position: | chr23:16171266-16171052 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 1082-1225 |
| Cow position: | chr23:14572942-14572800 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 114 |
| Conread position: | 1082-1242 |
| Cow position: | chr23:23285634-23285477 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 1082-1249 |
| Cow position: | chr23:37036317-37036471 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1082-1254 |
| Cow position: | chr23:9425662-9425831 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 55, 100 |
| Conread position: | 1082-1257 |
| Cow position: | chr23:20024014-20023841 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 1082-1280 |
| Cow position: | chr23:32845475-32845666 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 1082-1290 |
| Cow position: | chr23:9654290-9654492 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 169, 19 |
| Conread position: | 1082-1295 |
| Cow position: | chr23:15147457-15147665 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 1082-1295 |
| Cow position: | chr23:16479355-16479569 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 1082-1296 |
| Cow position: | chr23:23917422-23917208 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 114 |
| Conread position: | 1083-1226 |
| Cow position: | chr23:7571125-7571268 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 1083-1295 |
| Cow position: | chr23:24400636-24400852 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1084-1281 |
| Cow position: | chr23:30691484-30691673 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1090-1293 |
| Cow position: | chr23:30301864-30302072 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 1092-1257 |
| Cow position: | chr23:15694071-15694238 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 1093-1282 |
| Cow position: | chr23:39069680-39069871 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 1097-1249 |
| Cow position: | chr23:25078674-25078827 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 1099-1290 |
| Cow position: | chr23:36674246-36674430 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 1099-1296 |
| Cow position: | chr23:39822996-39822799 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 1106-1252 |
| Cow position: | chr23:30127221-30127366 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 1108-1269 |
| Cow position: | chr23:5258857-5258697 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 1111-1282 |
| Cow position: | chr23:25409343-25409173 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 1114-1270 |
| Cow position: | chr23:32869274-32869427 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 1121-1289 |
| Cow position: | chr23:9546900-9546734 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 1151-1282 |
| Cow position: | chr23:1250633-1250760 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1173-1284 |
| Cow position: | chr23:206318-206208 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.