Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1074-1283 |
| Cow position: | chr24:42338913-42338705 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 63, 120 |
| Conread position: | 1081-1290 |
| Cow position: | chr24:1295742-1295947 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 1082-1266 |
| Cow position: | chr24:37385848-37386028 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 1082-1282 |
| Cow position: | chr24:14913057-14913250 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 1082-1282 |
| Cow position: | chr24:32579696-32579507 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 1082-1282 |
| Cow position: | chr24:42817786-42817588 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 191, 32 |
| Conread position: | 1082-1290 |
| Cow position: | chr24:6177922-6177720 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 1082-1292 |
| Cow position: | chr24:16552483-16552690 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 1082-1292 |
| Cow position: | chr24:38644143-38643939 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1082-1295 |
| Cow position: | chr24:25246554-25246351 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 1083-1226 |
| Cow position: | chr24:35835516-35835657 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 1085-1255 |
| Cow position: | chr24:25935088-25934908 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 1086-1255 |
| Cow position: | chr24:44483883-44484042 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1087-1282 |
| Cow position: | chr24:21714682-21714873 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1087-1292 |
| Cow position: | chr24:33274371-33274168 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 1088-1268 |
| Cow position: | chr24:17417603-17417424 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 1089-1293 |
| Cow position: | chr24:9866958-9867157 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 1090-1251 |
| Cow position: | chr24:36550555-36550715 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 147 |
| Conread position: | 1090-1280 |
| Cow position: | chr24:43491194-43491381 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 1090-1282 |
| Cow position: | chr24:621073-620886 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1090-1289 |
| Cow position: | chr24:36853863-36853667 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 1091-1291 |
| Cow position: | chr24:30899308-30899508 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 1093-1282 |
| Cow position: | chr24:31301168-31301355 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 1094-1280 |
| Cow position: | chr24:19627933-19627745 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 43, 103 |
| Conread position: | 1094-1282 |
| Cow position: | chr24:43350588-43350773 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 1103-1254 |
| Cow position: | chr24:28598865-28599018 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 1107-1282 |
| Cow position: | chr24:17762767-17762941 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 1111-1254 |
| Cow position: | chr24:3089117-3088969 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1133-1282 |
| Cow position: | chr24:22839121-22839281 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1169-1282 |
| Cow position: | chr24:15475128-15475015 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 94 |
Show alignments to all cow chromosomes.