Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1082-1220 |
| Cow position: | chr27:12000255-12000117 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 1082-1256 |
| Cow position: | chr27:31523947-31524120 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1082-1257 |
| Cow position: | chr27:4922043-4921871 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 1082-1269 |
| Cow position: | chr27:18179263-18179078 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 55, 111 |
| Conread position: | 1082-1271 |
| Cow position: | chr27:12547956-12547767 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 1082-1282 |
| Cow position: | chr27:3935293-3935091 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 1082-1282 |
| Cow position: | chr27:4449900-4449712 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1082-1282 |
| Cow position: | chr27:9261228-9261431 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 151 |
| Conread position: | 1082-1282 |
| Cow position: | chr27:18056915-18057112 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1082-1289 |
| Cow position: | chr27:2246415-2246606 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 1082-1289 |
| Cow position: | chr27:17564446-17564651 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 1082-1291 |
| Cow position: | chr27:31238571-31238372 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 1082-1295 |
| Cow position: | chr27:15211167-15211385 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1083-1291 |
| Cow position: | chr27:26091997-26091791 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 1085-1258 |
| Cow position: | chr27:18573310-18573481 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 1088-1282 |
| Cow position: | chr27:18589165-18589350 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1088-1289 |
| Cow position: | chr27:11021187-11021377 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 1089-1289 |
| Cow position: | chr27:11935110-11935320 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 1107-1282 |
| Cow position: | chr27:7860330-7860153 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 1111-1280 |
| Cow position: | chr27:6534611-6534452 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1114-1271 |
| Cow position: | chr27:31376042-31376198 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1153-1282 |
| Cow position: | chr27:281136-281006 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 61 |
Show alignments to all cow chromosomes.