Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1060-1289 |
| Cow position: | chr28:32284427-32284651 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 117 |
| Conread position: | 1081-1226 |
| Cow position: | chr28:22361175-22361035 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1082-1242 |
| Cow position: | chr28:25926871-25926712 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 1082-1256 |
| Cow position: | chr28:6103260-6103091 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 1082-1282 |
| Cow position: | chr28:4802916-4803114 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 1082-1282 |
| Cow position: | chr28:5912293-5912491 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 55, 114 |
| Conread position: | 1082-1282 |
| Cow position: | chr28:10647540-10647736 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 1082-1282 |
| Cow position: | chr28:34346707-34346905 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 1082-1291 |
| Cow position: | chr28:34117642-34117434 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 1082-1293 |
| Cow position: | chr28:26626639-26626833 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 1086-1282 |
| Cow position: | chr28:15349997-15349814 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1088-1296 |
| Cow position: | chr28:24468590-24468390 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 1089-1281 |
| Cow position: | chr28:816537-816728 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 1093-1282 |
| Cow position: | chr28:31994101-31994298 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 185 |
| Conread position: | 1094-1274 |
| Cow position: | chr28:2341082-2340905 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 1099-1279 |
| Cow position: | chr28:7799661-7799839 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 1100-1257 |
| Cow position: | chr28:6276991-6277146 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1101-1271 |
| Cow position: | chr28:22339920-22339760 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 1101-1282 |
| Cow position: | chr28:3898578-3898396 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 1112-1280 |
| Cow position: | chr28:20095401-20095229 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 130 |
| Conread position: | 1123-1289 |
| Cow position: | chr28:11379278-11379448 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 64 |
| Conread position: | 1125-1291 |
| Cow position: | chr28:17482448-17482603 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1163-1280 |
| Cow position: | chr28:10987815-10987930 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 1185-1292 |
| Cow position: | chr28:23390793-23390687 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.