Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1076-1289 |
| Cow position: | chr29:4459145-4458936 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 1081-1235 |
| Cow position: | chr29:30814229-30814075 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 1082-1191 |
| Cow position: | chr29:18361148-18361260 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1082-1248 |
| Cow position: | chr29:849626-849457 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 1082-1271 |
| Cow position: | chr29:34392349-34392158 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 55, 148 |
| Conread position: | 1082-1277 |
| Cow position: | chr29:22655398-22655582 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 1082-1279 |
| Cow position: | chr29:7738151-7738343 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 1082-1280 |
| Cow position: | chr29:8890719-8890910 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 1082-1280 |
| Cow position: | chr29:19931875-19931683 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1082-1281 |
| Cow position: | chr29:681993-682183 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 1082-1282 |
| Cow position: | chr29:12193706-12193513 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1082-1287 |
| Cow position: | chr29:8907068-8906871 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 48, 80 |
| Conread position: | 1082-1289 |
| Cow position: | chr29:2480804-2481011 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 1082-1289 |
| Cow position: | chr29:7892417-7892623 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 1082-1289 |
| Cow position: | chr29:23989040-23988835 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 1082-1289 |
| Cow position: | chr29:34330677-34330897 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 200 |
| Conread position: | 1082-1295 |
| Cow position: | chr29:795141-794930 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 1093-1280 |
| Cow position: | chr29:21198112-21198288 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 1093-1282 |
| Cow position: | chr29:3346493-3346315 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1099-1274 |
| Cow position: | chr29:35037260-35037093 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 1104-1296 |
| Cow position: | chr29:478633-478453 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 1106-1242 |
| Cow position: | chr29:24442800-24442936 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 1117-1282 |
| Cow position: | chr29:5174498-5174334 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1118-1277 |
| Cow position: | chr29:2847910-2848065 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 55 |
Show alignments to all cow chromosomes.