Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1059-1264 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 1081-1266 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 1081-1282 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 1081-1295 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 1082-1205 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1082-1210 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 1082-1217 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1082-1262 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 1082-1263 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 1082-1274 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 193 |
| Conread position: | 1082-1274 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1082-1278 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1082-1280 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1082-1281 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 195 |
| Conread position: | 1082-1281 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 1082-1286 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 55, 107 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 112 |
| Conread position: | 1082-1292 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 1082-1292 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 1082-1295 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 153 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 1083-1226 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1085-1296 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 1085-1296 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 1086-1289 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 1086-1289 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1087-1289 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1088-1240 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 1088-1269 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 1088-1277 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1088-1279 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 1089-1267 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 1091-1289 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 1093-1248 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 1093-1251 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1095-1282 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 1099-1289 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 1100-1281 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 137, 76 |
| Conread position: | 1101-1282 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 1101-1289 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 1102-1282 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 1104-1282 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 1109-1291 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 82 |
Show alignments to all cow chromosomes.