Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1081-1233 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 1081-1279 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 1082-1220 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 1082-1235 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 1082-1249 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 1082-1251 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1082-1251 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 1082-1254 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 1082-1274 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 113 |
| Conread position: | 1082-1278 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 1082-1278 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 1082-1279 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 148, 32 |
| Conread position: | 1082-1280 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 1082-1280 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 1082-1280 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 1082-1281 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 55, 105 |
| Conread position: | 1082-1281 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1082-1281 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 48, 118 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 1082-1282 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1082-1287 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1082-1288 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 1082-1288 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 114 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 53, 93 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 112 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 1082-1289 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 1082-1291 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1082-1292 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 1082-1292 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 1082-1293 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 1082-1296 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 1083-1280 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 1083-1280 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 1083-1280 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 1087-1292 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 1088-1237 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 1088-1277 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 1088-1280 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 1088-1282 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 105, 39 |
| Conread position: | 1088-1295 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1088-1296 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 1094-1295 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 1096-1281 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 1097-1292 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 1100-1296 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1103-1289 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 1107-1292 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 1111-1277 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 1111-1281 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 1134-1275 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1152-1295 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1161-1282 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 1169-1295 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.