Cow genome map
Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
Conread position: | 1081-1233 |
Cow position: | chr5:54761596-54761446 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 17, 5 |
Conread position: | 1081-1279 |
Cow position: | chr5:31551398-31551203 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 19, 81 |
Conread position: | 1082-1220 |
Cow position: | chr5:31461772-31461628 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 54, 119 |
Conread position: | 1082-1235 |
Cow position: | chr5:31944156-31944004 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 28, 105 |
Conread position: | 1082-1249 |
Cow position: | chr5:9232706-9232869 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 56, 32 |
Conread position: | 1082-1251 |
Cow position: | chr5:12602456-12602294 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 1082-1251 |
Cow position: | chr5:37624639-37624470 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 135 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 48, 75 |
Conread position: | 1082-1254 |
Cow position: | chr5:67579616-67579447 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 139 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 54, 102 |
Conread position: | 1082-1274 |
Cow position: | chr5:27493300-27493109 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 149 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 50, 113 |
Conread position: | 1082-1278 |
Cow position: | chr5:33570415-33570234 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 149 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 29, 40 |
Conread position: | 1082-1278 |
Cow position: | chr5:70253231-70253033 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 55, 32 |
Conread position: | 1082-1279 |
Cow position: | chr5:29029907-29029709 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 158 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 148, 32 |
Conread position: | 1082-1280 |
Cow position: | chr5:19298915-19299108 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 54, 90 |
Conread position: | 1082-1280 |
Cow position: | chr5:47697825-47698021 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 161 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 107, 54 |
Conread position: | 1082-1280 |
Cow position: | chr5:51953441-51953242 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 162 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 50, 71 |
Conread position: | 1082-1281 |
Cow position: | chr5:9025745-9025545 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 157 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 55, 105 |
Conread position: | 1082-1281 |
Cow position: | chr5:20717680-20717492 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 1082-1281 |
Cow position: | chr5:35749100-35748910 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 151 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 53, 80 |
Conread position: | 1082-1282 |
Cow position: | chr5:9585181-9585378 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 158 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 48, 118 |
Conread position: | 1082-1282 |
Cow position: | chr5:13575187-13575383 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 159 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 55, 115 |
Conread position: | 1082-1282 |
Cow position: | chr5:20648698-20648893 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 164 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 110 |
Conread position: | 1082-1282 |
Cow position: | chr5:28770818-28770625 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 1082-1282 |
Cow position: | chr5:39118712-39118526 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 151 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1082-1287 |
Cow position: | chr5:53921990-53922189 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1082-1288 |
Cow position: | chr5:12329127-12329332 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 165 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 50, 102 |
Conread position: | 1082-1288 |
Cow position: | chr5:63621111-63620913 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 153 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 56, 114 |
Conread position: | 1082-1289 |
Cow position: | chr5:14072019-14072219 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 53, 93 |
Conread position: | 1082-1289 |
Cow position: | chr5:27679259-27679468 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 168 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 55, 29 |
Conread position: | 1082-1289 |
Cow position: | chr5:57490719-57490512 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 139 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 90, 112 |
Conread position: | 1082-1289 |
Cow position: | chr5:60969003-60968793 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 55, 77 |
Conread position: | 1082-1289 |
Cow position: | chr5:67463777-67463573 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 166 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 54, 149 |
Conread position: | 1082-1291 |
Cow position: | chr5:33516209-33516425 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 1082-1292 |
Cow position: | chr5:1304664-1304867 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 29, 36 |
Conread position: | 1082-1292 |
Cow position: | chr5:26562705-26562500 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 163 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 50, 90 |
Conread position: | 1082-1293 |
Cow position: | chr5:25355566-25355366 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 162 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 1082-1296 |
Cow position: | chr5:18379805-18379604 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 53, 71 |
Conread position: | 1082-1296 |
Cow position: | chr5:21145663-21145877 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 121 |
Conread position: | 1082-1296 |
Cow position: | chr5:60725825-60725615 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 158 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 56, 86 |
Conread position: | 1082-1296 |
Cow position: | chr5:71279216-71279003 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 76, 33 |
Conread position: | 1083-1280 |
Cow position: | chr5:1286929-1286730 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 158 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 47, 71 |
Conread position: | 1083-1280 |
Cow position: | chr5:23235029-23234841 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 155 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 49, 79 |
Conread position: | 1083-1280 |
Cow position: | chr5:56826607-56826411 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 152 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 23, 121 |
Conread position: | 1087-1292 |
Cow position: | chr5:12581253-12581066 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 157 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 49, 92 |
Conread position: | 1088-1237 |
Cow position: | chr5:42587349-42587497 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 48, 90 |
Conread position: | 1088-1277 |
Cow position: | chr5:54158009-54157818 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 148 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 92, 117 |
Conread position: | 1088-1280 |
Cow position: | chr5:11403938-11404127 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 138 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 44, 84 |
Conread position: | 1088-1282 |
Cow position: | chr5:51076066-51076259 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 144 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 105, 39 |
Conread position: | 1088-1295 |
Cow position: | chr5:39206738-39206940 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 158 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 1088-1296 |
Cow position: | chr5:56742212-56742011 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 50, 73 |
Conread position: | 1094-1295 |
Cow position: | chr5:26098127-26098323 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 36, 70 |
Conread position: | 1096-1281 |
Cow position: | chr5:34482994-34483175 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 41, 107 |
Conread position: | 1097-1292 |
Cow position: | chr5:29431116-29431298 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 147 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 39, 75 |
Conread position: | 1100-1296 |
Cow position: | chr5:56109607-56109809 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 152 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 1103-1289 |
Cow position: | chr5:15808375-15808560 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 152 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 29, 83 |
Conread position: | 1107-1292 |
Cow position: | chr5:57127990-57127812 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 149 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 30, 57 |
Conread position: | 1111-1277 |
Cow position: | chr5:12610137-12609975 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 26, 55 |
Conread position: | 1111-1281 |
Cow position: | chr5:55933325-55933159 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 123 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 26, 7 |
Conread position: | 1134-1275 |
Cow position: | chr5:48223788-48223916 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1152-1295 |
Cow position: | chr5:25925380-25925519 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1161-1282 |
Cow position: | chr5:26161514-26161635 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 21, 14 |
Conread position: | 1169-1295 |
Cow position: | chr5:53599576-53599696 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 89, 0 |
Show alignments to all cow chromosomes.