Cow genome map

Conread name: Ss1.1-Lng1-LNG010027H09.5

Conread position: 1081-1291
Cow position: chr6:31687612-31687814 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1082-1208
Cow position: chr6:24260227-24260354 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 121

Conread position: 1082-1249
Cow position: chr6:20748966-20748802 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 1082-1263
Cow position: chr6:35832133-35831956 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 73

Conread position: 1082-1269
Cow position: chr6:50502175-50501993 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 103

Conread position: 1082-1274
Cow position: chr6:20332894-20332701 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 55, 29

Conread position: 1082-1275
Cow position: chr6:19715665-19715851 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 73

Conread position: 1082-1276
Cow position: chr6:27711217-27711019 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 1082-1277
Cow position: chr6:55398377-55398193 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 105

Conread position: 1082-1279
Cow position: chr6:44389668-44389861 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 1082-1280
Cow position: chr6:24496348-24496544 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 95

Conread position: 1082-1280
Cow position: chr6:40241263-40241072 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 1082-1280
Cow position: chr6:53416375-53416579 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 113

Conread position: 1082-1280
Cow position: chr6:66677313-66677105 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 44

Conread position: 1082-1281
Cow position: chr6:14280240-14280038 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 56, 140

Conread position: 1082-1281
Cow position: chr6:55662315-55662116 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 42

Conread position: 1082-1282
Cow position: chr6:4665927-4666115 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 19

Conread position: 1082-1282
Cow position: chr6:35126533-35126722 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 33

Conread position: 1082-1282
Cow position: chr6:37085473-37085279 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 164, 109

Conread position: 1082-1282
Cow position: chr6:39917746-39917550 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 32

Conread position: 1082-1289
Cow position: chr6:3018049-3017846 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 29

Conread position: 1082-1289
Cow position: chr6:34557090-34556887 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 42

Conread position: 1082-1289
Cow position: chr6:44377852-44377646 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 29

Conread position: 1082-1289
Cow position: chr6:62328121-62327920 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 139, 102

Conread position: 1082-1295
Cow position: chr6:6635721-6635514 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 1082-1295
Cow position: chr6:35697837-35698050 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 126

Conread position: 1082-1296
Cow position: chr6:29078307-29078100 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 209, 32

Conread position: 1083-1280
Cow position: chr6:45616856-45617042 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 1086-1272
Cow position: chr6:5500486-5500672 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 91

Conread position: 1087-1295
Cow position: chr6:3373842-3374053 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 19

Conread position: 1088-1224
Cow position: chr6:58593571-58593705 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 1088-1282
Cow position: chr6:6722722-6722527 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 26

Conread position: 1088-1289
Cow position: chr6:41558058-41557859 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 44, 62

Conread position: 1088-1292
Cow position: chr6:43595970-43596173 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 49, 91

Conread position: 1091-1282
Cow position: chr6:39293739-39293558 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 46

Conread position: 1092-1254
Cow position: chr6:1939919-1940086 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 1100-1289
Cow position: chr6:33311668-33311485 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 64

Conread position: 1100-1293
Cow position: chr6:41157786-41157600 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 77

Conread position: 1101-1289
Cow position: chr6:62506919-62506731 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 170

Conread position: 1103-1289
Cow position: chr6:62753928-62754114 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 72

Conread position: 1107-1282
Cow position: chr6:1076860-1077036 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 11

Conread position: 1109-1292
Cow position: chr6:32428994-32428816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 69

Conread position: 1111-1253
Cow position: chr6:3742025-3741895 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 1112-1291
Cow position: chr6:66840422-66840242 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 60

Conread position: 1114-1296
Cow position: chr6:811852-812037 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 1144-1252
Cow position: chr6:12808713-12808818 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Show alignments to all cow chromosomes.