Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1069-1289 |
| Cow position: | chr7:63328689-63328478 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 1081-1229 |
| Cow position: | chr7:43257776-43257630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 113 |
| Conread position: | 1081-1296 |
| Cow position: | chr7:42221840-42222051 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 5 |
| Conread position: | 1082-1233 |
| Cow position: | chr7:64367279-64367125 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 1082-1236 |
| Cow position: | chr7:32589394-32589234 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 1082-1270 |
| Cow position: | chr7:30027724-30027535 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 1082-1277 |
| Cow position: | chr7:12920063-12920258 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 1082-1277 |
| Cow position: | chr7:56356492-56356683 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 169, 92 |
| Conread position: | 1082-1281 |
| Cow position: | chr7:5247356-5247548 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 1082-1282 |
| Cow position: | chr7:40622758-40622568 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 1082-1282 |
| Cow position: | chr7:62048993-62048798 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 1082-1289 |
| Cow position: | chr7:39512031-39512221 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1082-1289 |
| Cow position: | chr7:59204866-59204649 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 1082-1292 |
| Cow position: | chr7:5701507-5701296 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 1082-1292 |
| Cow position: | chr7:53409182-53408969 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 1082-1292 |
| Cow position: | chr7:61426156-61425948 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1082-1295 |
| Cow position: | chr7:20104425-20104640 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 1082-1296 |
| Cow position: | chr7:29377573-29377778 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 1082-1296 |
| Cow position: | chr7:52131710-52131495 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 1083-1289 |
| Cow position: | chr7:45063837-45064038 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 1085-1277 |
| Cow position: | chr7:6532782-6532965 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 1085-1290 |
| Cow position: | chr7:62516590-62516385 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 1086-1296 |
| Cow position: | chr7:68366663-68366879 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 1088-1199 |
| Cow position: | chr7:8893470-8893584 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1088-1249 |
| Cow position: | chr7:43004962-43004806 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 1088-1253 |
| Cow position: | chr7:11592653-11592811 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 1088-1260 |
| Cow position: | chr7:54060255-54060436 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1088-1281 |
| Cow position: | chr7:20288686-20288873 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 1088-1296 |
| Cow position: | chr7:46216624-46216417 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 1091-1295 |
| Cow position: | chr7:13823360-13823164 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 198, 43 |
| Conread position: | 1091-1296 |
| Cow position: | chr7:64198309-64198511 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 131 |
| Conread position: | 1105-1282 |
| Cow position: | chr7:45099783-45099617 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1107-1291 |
| Cow position: | chr7:56664614-56664443 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 30, 78 |
| Conread position: | 1134-1295 |
| Cow position: | chr7:65952868-65953030 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 1151-1275 |
| Cow position: | chr7:11188606-11188486 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1152-1295 |
| Cow position: | chr7:31441837-31441979 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1153-1280 |
| Cow position: | chr7:30642520-30642396 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.