Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027H09.5 |
| Conread position: | 1073-1296 |
| Cow position: | chr8:33438356-33438127 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 1078-1270 |
| Cow position: | chr8:6959478-6959661 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 1080-1282 |
| Cow position: | chr8:40273088-40273288 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 1082-1177 |
| Cow position: | chr8:32720462-32720367 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1082-1226 |
| Cow position: | chr8:7102636-7102492 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 1082-1226 |
| Cow position: | chr8:18725758-18725611 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1082-1242 |
| Cow position: | chr8:5803735-5803570 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 1082-1249 |
| Cow position: | chr8:31185789-31185621 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 1082-1275 |
| Cow position: | chr8:6507724-6507914 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 1082-1279 |
| Cow position: | chr8:2975219-2975024 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 1082-1281 |
| Cow position: | chr8:54159291-54159092 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 1082-1282 |
| Cow position: | chr8:10167376-10167191 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 1082-1282 |
| Cow position: | chr8:18801783-18801591 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 1082-1282 |
| Cow position: | chr8:18883378-18883178 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 1082-1282 |
| Cow position: | chr8:19773021-19772831 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 1082-1282 |
| Cow position: | chr8:23440560-23440752 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 1082-1282 |
| Cow position: | chr8:53892082-53891886 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 1082-1287 |
| Cow position: | chr8:51877400-51877604 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 109 |
| Conread position: | 1082-1289 |
| Cow position: | chr8:9672431-9672224 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 52 |
| Conread position: | 1082-1289 |
| Cow position: | chr8:19793169-19793369 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 1082-1289 |
| Cow position: | chr8:48681939-48682149 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 1082-1292 |
| Cow position: | chr8:14617346-14617551 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 1082-1292 |
| Cow position: | chr8:28387229-28387434 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 1082-1292 |
| Cow position: | chr8:34440012-34439806 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 1082-1295 |
| Cow position: | chr8:8480097-8480318 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1082-1295 |
| Cow position: | chr8:22102638-22102852 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 1083-1282 |
| Cow position: | chr8:19368965-19369152 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 1085-1295 |
| Cow position: | chr8:5874692-5874488 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 1086-1265 |
| Cow position: | chr8:37193517-37193345 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 1086-1291 |
| Cow position: | chr8:40432321-40432522 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 1086-1292 |
| Cow position: | chr8:53359409-53359616 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 1087-1273 |
| Cow position: | chr8:6763736-6763918 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 1087-1292 |
| Cow position: | chr8:42151461-42151655 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1088-1252 |
| Cow position: | chr8:9986337-9986169 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 154 |
| Conread position: | 1089-1289 |
| Cow position: | chr8:33818695-33818886 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1089-1291 |
| Cow position: | chr8:30021379-30021578 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 106, 177 |
| Conread position: | 1090-1295 |
| Cow position: | chr8:7103872-7104068 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 1096-1296 |
| Cow position: | chr8:4336522-4336720 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 1100-1277 |
| Cow position: | chr8:49406189-49406360 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 1108-1281 |
| Cow position: | chr8:54828765-54828595 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 31, 87 |
| Conread position: | 1113-1272 |
| Cow position: | chr8:26040864-26041021 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 146, 79 |
Show alignments to all cow chromosomes.